Commits · 41d8cbfa35e588eb038cde075b00abd1318aa8a4 · graintracking / DCT

Apr 28, 2013

do not assume 2048 x 2048 detector in gtDBBrowseEntireDiffractionVolume · 9225cf02
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Andrew King <andrew.king@esrf.fr>
```
9225cf02

gtSetupSegmentation_doublethr : changed choice of full images, fixed bug for... · 13be3272

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

gtSetupSegmentation_doublethr : changed choice of full images, fixed bug for seg.bbox if it was not defined before and it has been extended

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

13be3272

Cleaned doublethr segmentation and killed whitespaces · 73c54d81

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@867 4c865b51-4357-4376-afb4-474e03ccb993

73c54d81

Parameters checking: extended to other setup functions and added extra check · 7cd3f048

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@866 4c865b51-4357-4376-afb4-474e03ccb993

7cd3f048

SoftThresholding/ Blobs: changed threshold to one only minimum per blob · 4195207c

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@838 4c865b51-4357-4376-afb4-474e03ccb993

4195207c

Call GtVolView function instead of deprecated gtVolView · 41123393
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@829 4c865b51-4357-4376-afb4-474e03ccb993
```
41123393
fix omega angles used in 2DFBP reconstruction depending on rotation sense · b66deb10
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@811 4c865b51-4357-4376-afb4-474e03ccb993
```
b66deb10
Added a warning, didn't change funcionaliuty · 87ae4483
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@728 4c865b51-4357-4376-afb4-474e03ccb993
```
87ae4483
Bug fix when saving parameters in setupFS, add edf info to get full image. AK · b65d4c8b
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@686 4c865b51-4357-4376-afb4-474e03ccb993
```
b65d4c8b

Segmentation/doublethr: tried to cope with strange behavior and reformatted code a little bit · dd05096d

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@652 4c865b51-4357-4376-afb4-474e03ccb993

dd05096d

temporary fix for database in gtDBBlob2SpotTable · b37e0388
Wolfgang Ludwig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@649 4c865b51-4357-4376-afb4-474e03ccb993
```
b37e0388

Cleanups and small fixes · 0d9f6f86

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@643 4c865b51-4357-4376-afb4-474e03ccb993

0d9f6f86

Compilation/OAR: yet another fix for global variables · bd827fde

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@624 4c865b51-4357-4376-afb4-474e03ccb993

bd827fde

Blob2Spot: use the new EDF minimal parameter · 25540ca6

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@619 4c865b51-4357-4376-afb4-474e03ccb993

25540ca6

OAR/Globals: second patch, autogenerated, that loads the workspace · fc0cb845

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@617 4c865b51-4357-4376-afb4-474e03ccb993

fc0cb845

Blobs2Spots: avoid saving DB fields in parameters · 9f1daf0c

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@605 4c865b51-4357-4376-afb4-474e03ccb993

9f1daf0c

DB: dbInsert: yet another fix about API · 15431dd2

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@603 4c865b51-4357-4376-afb4-474e03ccb993

15431dd2

Segmentation: fixed a bug introduced in a previous commit · ba15757e

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@601 4c865b51-4357-4376-afb4-474e03ccb993

ba15757e

DB/dbInsert: fixed bug in Blob2SpotTable, because of a mismatch between DB APIs. · 1f05f415

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@600 4c865b51-4357-4376-afb4-474e03ccb993

1f05f415

Difspots/Thresholding: added soft thresholding options and recycled EDF header · e364da18

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@589 4c865b51-4357-4376-afb4-474e03ccb993

e364da18

Segmentation/doublethr: speeded up seeds part, by recycling EDF header. · 5208605f

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@586 4c865b51-4357-4376-afb4-474e03ccb993

5208605f

function to check analysis progress, twin assembly added to GtAssembleVol3D · f64099de
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@564 4c865b51-4357-4376-afb4-474e03ccb993
```
f64099de

fixing a coordinate bug (detposcorner > pixels) in gtForwardSimulation_v2 -... · 28663a1f

Wolfgang Ludwig authored 12 years ago and

Nicola Vigano committed 11 years ago

fixing a coordinate bug (detposcorner > pixels) in gtForwardSimulation_v2  - load tables at beginning

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@554 4c865b51-4357-4376-afb4-474e03ccb993

28663a1f

EDF: fixed header length determination, so we can skip checking it each time! · fd7e9b38

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@538 4c865b51-4357-4376-afb4-474e03ccb993

fd7e9b38

gtSetup : add default parameters functions to reduced the length of gtSetup... · 4908f2e6

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

gtSetup : add default parameters functions to reduced the length of gtSetup and simplify the reset of some parameters

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@533 4c865b51-4357-4376-afb4-474e03ccb993

4908f2e6

Cleaning of the 2_difspot folder · 1a4bb2e7
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@532 4c865b51-4357-4376-afb4-474e03ccb993
```
1a4bb2e7
Initial cleaning on 2_difspot · e43218d8
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@529 4c865b51-4357-4376-afb4-474e03ccb993
```
e43218d8

EDF/BlobSegmentation: reused EDF dataformat information, and just recompute the headerlength · 9b027bce

Nicola Vigano authored 12 years ago

This drops the EDF read time to the 20% of before. (6x speedup)

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@515 4c865b51-4357-4376-afb4-474e03ccb993

9b027bce

Segmentation/dbMultipleInsert: initial fix for performance bug and huge cleanup of the code · 8230b12a

Nicola Vigano authored 12 years ago

The insertion of multiple columns to the database now takes ~28-30% of the time it was taking before.
Anyway, there still can be a speedup in in grouping more "sprintf"s together. (loop unrolling)

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@511 4c865b51-4357-4376-afb4-474e03ccb993

8230b12a

Check beam intensity before launching setup segmentation · c77025fe
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@506 4c865b51-4357-4376-afb4-474e03ccb993
```
c77025fe
Comment sin headers : remove tag "%[use]- " from functions and improveing the comments · ca6e80bf
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@500 4c865b51-4357-4376-afb4-474e03ccb993
```
ca6e80bf
Check images are present before starting segmentation · 7819aba5
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@476 4c865b51-4357-4376-afb4-474e03ccb993
```
7819aba5

Bug fixing in gtMatchUpdatePairs, gtIndexAllGrainValues. Speed up in... · 258da11c

Peter Reischig authored 12 years ago and

Nicola Vigano committed 11 years ago

Bug fixing in gtMatchUpdatePairs, gtIndexAllGrainValues. Speed up in gtDBBlob2SpotTable_WriteDifspots.m when not writing edf files.

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@439 4c865b51-4357-4376-afb4-474e03ccb993

258da11c

Fixed recent bug in gtDBBrowseDiffractionVolume: now it can return empty... · 6d1e42d5

Peter Reischig authored 12 years ago and

Nicola Vigano committed 11 years ago

Fixed recent bug in gtDBBrowseDiffractionVolume: now it can return empty again. Change of dialogs for parameter settings in gtSetup.

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@425 4c865b51-4357-4376-afb4-474e03ccb993

6d1e42d5

fixing gtSetup, calibration · 7b97df06
Wolfgang Ludwig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@418 4c865b51-4357-4376-afb4-474e03ccb993
```
7b97df06

Update of segmentation functions to new parameters; cleaning; removed the... · d6e12697

Peter Reischig authored 12 years ago and

Nicola Vigano committed 11 years ago

Update of segmentation functions to new parameters; cleaning; removed the median filter in single thrashold segmentation as it is done in preprocessing

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@404 4c865b51-4357-4376-afb4-474e03ccb993

d6e12697

Segmentation : merging · 32a4a97d

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@403 4c865b51-4357-4376-afb4-474e03ccb993

32a4a97d

Segmentation : fix seg.difspotmask name · 70069d8f

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

Parameters version 2 : fix index.strategy.m.end.angf variable fields

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@402 4c865b51-4357-4376-afb4-474e03ccb993

70069d8f

Update of segmentation parameters; impixelinfo bug fix in gtSetupSegmentation... · d1b7431d

Peter Reischig authored 12 years ago and

Nicola Vigano committed 11 years ago

Update of segmentation parameters; impixelinfo bug fix in gtSetupSegmentation GUIs; cleaning of segmentation functions

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@401 4c865b51-4357-4376-afb4-474e03ccb993

d1b7431d

Updated and cleaned single threshold segmentation to adapt to new parameters. · cd938b76
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@399 4c865b51-4357-4376-afb4-474e03ccb993
```
cd938b76