Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: preischig <preischig@gmail.com>

Signed-off-by: preischig <preischig@gmail.com>

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

DB tables : replaced 'error' command with 'lastwarn' . The user is warned about the existence of the tables in the database. It's not an error

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

gtCopy : added sensortype 'Frelon hd4m' to be chosen for kodak correction

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

Signed-off-by: Yoann Guilhem <yoann.guilhem@esrf.fr>

Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago

Signed-off-by: Peter Reischig <peter.reischig@esrf.fr>

Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@922 4c865b51-4357-4376-afb4-474e03ccb993

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@608 4c865b51-4357-4376-afb4-474e03ccb993

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@600 4c865b51-4357-4376-afb4-474e03ccb993

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@586 4c865b51-4357-4376-afb4-474e03ccb993

Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@551 4c865b51-4357-4376-afb4-474e03ccb993

another 5-10x more.

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@537 4c865b51-4357-4376-afb4-474e03ccb993

The insertion of multiple columns to the database now takes ~28-30% of the time it was taking before.
Anyway, there still can be a speedup in in grouping more "sprintf"s together. (loop unrolling)

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@511 4c865b51-4357-4376-afb4-474e03ccb993

Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@500 4c865b51-4357-4376-afb4-474e03ccb993

Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago

zUtil_Parameters : modified print_structure to print structures which contain other structures and fix bug in update_parameters
zUtil_Help       : update and fix gtCopyDataForTest
gtSetup_Utils    : create gtUpdateXmlFile to have more info from header of raw images and save info into the parameters file in gtSetup
zUtil_DB         : create gtDBCopyAllTables to copy all the database tables from a dataset

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@464 4c865b51-4357-4376-afb4-474e03ccb993

Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago

Bug fixing in gtMatchUpdatePairs, gtIndexAllGrainValues. Speed up in gtDBBlob2SpotTable_WriteDifspots.m when not writing edf files.

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@439 4c865b51-4357-4376-afb4-474e03ccb993

Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago

CREATE gtDBUpdateColumn  : update values in a table in the database for a specific field

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@427 4c865b51-4357-4376-afb4-474e03ccb993

Peter Reischig authored 13 years ago and Nicola Vigano committed 11 years ago

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@252 4c865b51-4357-4376-afb4-474e03ccb993

Peter Reischig authored 13 years ago and Nicola Vigano committed 11 years ago

Parameters version 2 added (build_list_v2.m, make_parameters.m). Changes to fields in spot pair table (gtDBCreateSpotPairTable.m).

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@242 4c865b51-4357-4376-afb4-474e03ccb993

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@154 4c865b51-4357-4376-afb4-474e03ccb993

Laura Nervo authored 13 years ago and Nicola Vigano committed 11 years ago

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@119 4c865b51-4357-4376-afb4-474e03ccb993

Laura Nervo authored 13 years ago and Nicola Vigano committed 11 years ago

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@102 4c865b51-4357-4376-afb4-474e03ccb993

Peter Reischig authored 15 years ago and Nicola Vigano committed 11 years ago

Matching is further developed. Goodness of spots and goodness thresholds can now be used in matching.
All user function names start with gtMATCH...

2) OPTIMIZATION OF TILTS
Optimization of tilts and detector distance finally works (see help of gtMATCHCorrectGeo) consistently. At least, I tested it on the strain dataset. If it doesn't, you can still plot the 3D cost function and optimize manually.

3) Double threshold SEGMENTATION
Lower and upper limits are added to the double threshold segmentation, so th2 that is used for growing a seed is constrained to remain between a minimum (parameters.seg.th_grow_low) and maximum value (parameters.seg.th_grow_high). They are ignored if left empty. These additional parameters are added to gtSetup as well.

4) Difpot tables
They now have an additional column which will be used in the future to mark and reject bad ones.

5) Determination of Extinction Start/End images (gtDBBlob2SpotTable_WriteDifspots)
It's more elegant involving new parameters (included in gtSetup).

6) Creation of difspots from blobs (gtDBBlob2SpotTable_WriteDifspots)
The difspots written as edf-s are created from the full-s under the blob mask (none/blob2D/blob3D)

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@46 4c865b51-4357-4376-afb4-474e03ccb993

Wolfgang Ludwig authored 15 years ago and Nicola Vigano committed 11 years ago

updating 3D reconstruction macros

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@42 4c865b51-4357-4376-afb4-474e03ccb993

Peter Reischig authored 15 years ago and Nicola Vigano committed 11 years ago

folder 3b_match_difspots

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@40 4c865b51-4357-4376-afb4-474e03ccb993

Andrew King authored 15 years ago and Nicola Vigano committed 11 years ago

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@35 4c865b51-4357-4376-afb4-474e03ccb993

Andrew King authored 15 years ago and Nicola Vigano committed 11 years ago

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@34 4c865b51-4357-4376-afb4-474e03ccb993

Andrew King authored 15 years ago and Nicola Vigano committed 11 years ago

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@30 4c865b51-4357-4376-afb4-474e03ccb993

Erik Lauridsen authored 15 years ago and Nicola Vigano committed 11 years ago

Determine rotation axis from images at end of scan rather from first and last image in the scan
Added field parameters.database for automatic recognition of which database has to be used

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@29 4c865b51-4357-4376-afb4-474e03ccb993

Erik Lauridsen authored 15 years ago and Nicola Vigano committed 11 years ago

parameter file to find out which database it should connect to.
Default is the old one + new datasets should have field
parameters.database with subfields
database.name
database.user
database.password
database.host

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@28 4c865b51-4357-4376-afb4-474e03ccb993