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  • tomotools
  • nxtomomillnxtomomill
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  • !104

Rework edf2nx (add configuration file)

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Merged payno requested to merge rework_edf2nx into master Apr 21, 2022
  • Overview 0
  • Commits 30
  • Pipelines 19
  • Changes 26

TODO

Requires tomoscan!77 (merged)

  • use a configuration class instead of options provided directory
  • allow several values for rotation angle key (see #101 (closed) )
  • allow user to define unit of different field on the spec-edf as pixel size, sample / detector distance ... (see #100 (closed) )
  • let user provide a different file prefix than the folder name and provide information contained in .info (see #98 (closed)) I guess those modifications will impact tomoscan
  • let user define more angles options (see #97 (closed))
  • improve handling of negative ScanRange (see #102 (closed) ).
  • in order to let the user define a .info file and to avoid improving complexity of the code we will convert the .info contain into a dict and provide this one to the EDFTomoScan class
  • add an application to generate an edf2nx configuration file
  • update tutorial for edf2nx
  • try to deduce field of view for edf as well
  • move default distance , x/y/x translation to centimeter instead of meter. Make more sense.
  • move tomoscan dependency to 0.9.0a

extra

  • edf2nx: check input parameter is a folder. Otherwise raise an error
  • close #102 (closed)
  • close #101 (closed)
  • close #100 (closed)
  • close #99 (closed)
  • close #98 (closed)
  • close #97 (closed)
Edited Apr 27, 2022 by payno
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Source branch: rework_edf2nx