Commits · cc8ef242675ba6e2f9427047db4a713214990b42 · graintracking / DCT

Apr 28, 2013

Add new functions to switch from an orientation description to another: · cc8ef242

Yoann Guilhem authored 12 years ago and

Nicola Vigano committed 11 years ago

- Orientation matrix g
- Rodrigues vector r
- Euler angles (phi1, phi, phi2), Bunge convention ZXZ

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@615 4c865b51-4357-4376-afb4-474e03ccb993

cc8ef242

Compiling: added option in the conf.xml file to specify mex path · 2f39713c
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@614 4c865b51-4357-4376-afb4-474e03ccb993
```
2f39713c
Removed executable bit on matlab files · fcd7a610
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@613 4c865b51-4357-4376-afb4-474e03ccb993
```
fcd7a610
Formatting help for gtHSTParamWriter and gtHSTParamReader · 4f7c92c0
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@612 4c865b51-4357-4376-afb4-474e03ccb993
```
4f7c92c0

TIF tools: · 875491cd

Yoann Guilhem authored 12 years ago and

Nicola Vigano committed 11 years ago

- Adding help in gtTIFVolWriter and gtTIFVolReader
- Adding new features in gtTIFVolWriter
- Cleaning useless function

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@611 4c865b51-4357-4376-afb4-474e03ccb993

875491cd

database based version of file lock · 1398b343
Wolfgang Ludwig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@610 4c865b51-4357-4376-afb4-474e03ccb993
```
1398b343

gtSetup: got rid of useless DB parameters · 40ad03f5

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@609 4c865b51-4357-4376-afb4-474e03ccb993

40ad03f5

DB: moved connection to use parameters loaded from conf.xml as default · 98ddcdaa

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@608 4c865b51-4357-4376-afb4-474e03ccb993

98ddcdaa

Global variables: securing global variables use, and added explanation · 2e9fffc2

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@607 4c865b51-4357-4376-afb4-474e03ccb993

2e9fffc2

Compiling: added option in the conf.xml file to specify matlab version · 8a747609

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@606 4c865b51-4357-4376-afb4-474e03ccb993

8a747609

Blobs2Spots: avoid saving DB fields in parameters · 9f1daf0c

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@605 4c865b51-4357-4376-afb4-474e03ccb993

9f1daf0c

fixing problems with pixelsize in ForwardSimulation · 747432cf
Wolfgang Ludwig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@604 4c865b51-4357-4376-afb4-474e03ccb993
```
747432cf

DB: dbInsert: yet another fix about API · 15431dd2

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@603 4c865b51-4357-4376-afb4-474e03ccb993

15431dd2

Raw Volume reader: fixed some small issues · cd94db7e

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@602 4c865b51-4357-4376-afb4-474e03ccb993

cd94db7e

Segmentation: fixed a bug introduced in a previous commit · ba15757e

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@601 4c865b51-4357-4376-afb4-474e03ccb993

ba15757e

DB/dbInsert: fixed bug in Blob2SpotTable, because of a mismatch between DB APIs. · 1f05f415

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@600 4c865b51-4357-4376-afb4-474e03ccb993

1f05f415

Modifed help and adpated variable names to latest DCT conventions. · dfaa9b0d
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@599 4c865b51-4357-4376-afb4-474e03ccb993
```
dfaa9b0d
Modified to speed up. · 29e07cdd
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@598 4c865b51-4357-4376-afb4-474e03ccb993
```
29e07cdd

gtIVPhexCmap : fix bug · 93f19874

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@597 4c865b51-4357-4376-afb4-474e03ccb993

93f19874

OAR : add some functionalities (not perfect...but working) · 113d8663

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

      (first attempt to handle resubmission of jobs)

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@596 4c865b51-4357-4376-afb4-474e03ccb993

113d8663

Now input is loaded if not specified. Updated help. · c01f7d5e
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@595 4c865b51-4357-4376-afb4-474e03ccb993
```
c01f7d5e
Added capacity to filter out bad pairs before strain fitting. · a3fd6608
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@594 4c865b51-4357-4376-afb4-474e03ccb993
```
a3fd6608
More... better oar reading · 33e9db79
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@593 4c865b51-4357-4376-afb4-474e03ccb993
```
33e9db79
and more... · a5000a8a
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@592 4c865b51-4357-4376-afb4-474e03ccb993
```
a5000a8a
Further tweaks · 190ad571
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@591 4c865b51-4357-4376-afb4-474e03ccb993
```
190ad571
Added limited oar check to gtStatus · 73ddaab1
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@590 4c865b51-4357-4376-afb4-474e03ccb993
```
73ddaab1

Difspots/Thresholding: added soft thresholding options and recycled EDF header · e364da18

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@589 4c865b51-4357-4376-afb4-474e03ccb993

e364da18

Bug fix: input 'cryst' was missing. Now 'grain.hklsp' field is properly included in outputadded. · 3c2552b3
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@588 4c865b51-4357-4376-afb4-474e03ccb993
```
3c2552b3

Small modifications in matching GUI: changed zoom behaviour; spot size... · b0317e40

Peter Reischig authored 12 years ago and

Nicola Vigano committed 11 years ago

Small modifications in matching GUI: changed zoom behaviour; spot size constraint is used directly at matching stage not when loading data; parameter 'match.addconstr' is disabled.

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@587 4c865b51-4357-4376-afb4-474e03ccb993

b0317e40

Segmentation/doublethr: speeded up seeds part, by recycling EDF header. · 5208605f

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@586 4c865b51-4357-4376-afb4-474e03ccb993

5208605f

Assembling: made twin case faster · e0922668

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@585 4c865b51-4357-4376-afb4-474e03ccb993

e0922668

Rodriguez -> g: some more speedup · cdbd3a85

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@584 4c865b51-4357-4376-afb4-474e03ccb993

cdbd3a85

Bug fix: corrected U-V angle fitting parameters. · 40be01eb
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@583 4c865b51-4357-4376-afb4-474e03ccb993
```
40be01eb

gtINDEXDrawGrainUnitCells : Adapting to the strain code... · ec506280

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@582 4c865b51-4357-4376-afb4-474e03ccb993

ec506280

Boundaries : commenting and formatting · e2a2d609

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@581 4c865b51-4357-4376-afb4-474e03ccb993

e2a2d609

Conflicts : handle saving of files, deselecting of difspots in common, save a diary · bf1509e8
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@580 4c865b51-4357-4376-afb4-474e03ccb993
```
bf1509e8
Pole figure, Inverse Pole Figure and Caxis colourmap for hexagonal materials · 9c4bba42
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@579 4c865b51-4357-4376-afb4-474e03ccb993
```
9c4bba42

Added function to plot hexagonal prism instead of cube for hexagonal materials. · d37496ef

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


     gtINDEXDrawGrainUnitCells(grain, parameters, phaseid,  type, numbered, hlight, strainscale)
     -------------------------------------------------------------------------------------------

     Draws a figure representing grain size, location and orientation by
     cubes or hexagonal prismes based on the their Rodrigues vectors.

     INPUT:
       grains      = grain structure from indexing
       parameters  = as in parameters file (required field: labgeo)
       phaseid     = phase number <int> {1}
       type        = cell type {'cubic'} / 'hexagonal'
       numbered    = if true, the grain id-s for each grain are shown
       hlight      = grain id-s to be highlighted
       strainscale = a multiplicative factor for the strain components
                     for better visibility (if strain data available)

     Version 001 28-06-2012 by LNervo
       Modified gtINDEXDrawGrainCubes : cubes or hexagons can be drawn

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@578 4c865b51-4357-4376-afb4-474e03ccb993

d37496ef

Moving functions in the right folder. · 8082cdfe

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@577 4c865b51-4357-4376-afb4-474e03ccb993

8082cdfe

Bug fix: handles input for impixelinfo corrected. · b286407b
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@576 4c865b51-4357-4376-afb4-474e03ccb993
```
b286407b