Commits · b5344d5fca9d52c31277386ba4a6f618cce09084 · graintracking / DCT

Apr 28, 2013

Fix use of gtCrystHKL2CartesianMatrix · b5344d5f

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@874 4c865b51-4357-4376-afb4-474e03ccb993

b5344d5f

Added inputs 'spacegroup' and 'latticepar' where needed and general commenting, formatting ... · b1bcd9a3
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@873 4c865b51-4357-4376-afb4-474e03ccb993
```
b1bcd9a3

gtPlotUVW : function to plot UV list from forward simulation on summed image... · 550a4877

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

gtPlotUVW : function to plot UV list from forward simulation on summed image of difspots if existing, using the current fitted geometry
UV list is produced by gtCalculateGrain

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@872 4c865b51-4357-4376-afb4-474e03ccb993

550a4877

GtSample : improve handling of conflicts and simplify updating of sample.mat · 1cbf8e05
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@871 4c865b51-4357-4376-afb4-474e03ccb993
```
1cbf8e05
gtINDEXDrawGrainUnitCells : enlarged a bit the sample radius and top margins · a48d07bd
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@870 4c865b51-4357-4376-afb4-474e03ccb993
```
a48d07bd

Update every orientation description conversion functions: · 890fc772

Yoann Guilhem authored 12 years ago and

Nicola Vigano committed 11 years ago

- vectorized every functions for efficient massive conversions
- fix help header

Warning: orientations matrices are now given and output as cell arrays of 3x3 matrices
So update your personal functions if you call one of these functions

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@869 4c865b51-4357-4376-afb4-474e03ccb993

890fc772

Benchmarks/Astra: added check on the transmission · 87314899

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@868 4c865b51-4357-4376-afb4-474e03ccb993

87314899

Cleaned doublethr segmentation and killed whitespaces · 73c54d81

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@867 4c865b51-4357-4376-afb4-474e03ccb993

73c54d81

Parameters checking: extended to other setup functions and added extra check · 7cd3f048

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@866 4c865b51-4357-4376-afb4-474e03ccb993

7cd3f048

mod to use indexing output in rvector colormap · c0017156
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@865 4c865b51-4357-4376-afb4-474e03ccb993
```
c0017156

Trivial trailing whitespace killing · 25404981

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@864 4c865b51-4357-4376-afb4-474e03ccb993

25404981

ForwardSimulation: added parameter for customizing oversize of the to be reconstructed volume · 27637c43

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@863 4c865b51-4357-4376-afb4-474e03ccb993

27637c43

Parameters: add parameters checking against defaults, in some gtSetup* funcs · 675f4bc3

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@862 4c865b51-4357-4376-afb4-474e03ccb993

675f4bc3

Add compression mode option in gtTIFVolWriter · fea40829
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@861 4c865b51-4357-4376-afb4-474e03ccb993
```
fea40829
Removed executable bit from Matlab source files · f1297494
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@860 4c865b51-4357-4376-afb4-474e03ccb993
```
f1297494
Documentation: removed executable bit from figure files · e1dcffaf
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@859 4c865b51-4357-4376-afb4-474e03ccb993
```
e1dcffaf
Speed up rgb2hsl by preallocating hsl array · 2d00ada4
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@858 4c865b51-4357-4376-afb4-474e03ccb993
```
2d00ada4
Commenting, formating and adding a variable for progress output · 4988327b
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@857 4c865b51-4357-4376-afb4-474e03ccb993
```
4988327b
Cleaning: removed the most useless function ever · 982080c4
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@856 4c865b51-4357-4376-afb4-474e03ccb993
```
982080c4
Bugfix: wrong type (mwIndex was used out of mex interface) · cc004e8a
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@855 4c865b51-4357-4376-afb4-474e03ccb993
```
cc004e8a

Benchmarks: Added ASTRA benchmarking · bd6b5ab6

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@854 4c865b51-4357-4376-afb4-474e03ccb993

bd6b5ab6

gtIVPhexCmap : saves output map into map.mat · a2dfa601

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@853 4c865b51-4357-4376-afb4-474e03ccb993

a2dfa601

gtSolveGrainsConflicts : fixed bug with 'arrayfun', used saveToFile method of... · e2ebeffc

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

gtSolveGrainsConflicts : fixed bug with 'arrayfun', used saveToFile method of GtSample, formatting the output...

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@852 4c865b51-4357-4376-afb4-474e03ccb993

e2ebeffc

Boundaries and twins : saved output from gt_find_grain_boundaries, saved... · f3ca3847

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

Boundaries and twins : saved output from gt_find_grain_boundaries, saved mis_axis_hex in gtReadBoundaryProperties, changed table in gtTwinTest

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@851 4c865b51-4357-4376-afb4-474e03ccb993

f3ca3847

Symmetry Operators : renamed function with 'Cryst', some formatting · 12b3b0dd
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@850 4c865b51-4357-4376-afb4-474e03ccb993
```
12b3b0dd
gtUpdateGrainsConflicts : fixed bug with merging and saving sample.mat · f6bbbd2d
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@849 4c865b51-4357-4376-afb4-474e03ccb993
```
f6bbbd2d

GtThreshold : fix bug with 'mergeToFile' · 087eaaa2

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@848 4c865b51-4357-4376-afb4-474e03ccb993

087eaaa2

Forward Simulation : fix bug while checking output from Fsim, formatting · bc94c579
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@847 4c865b51-4357-4376-afb4-474e03ccb993
```
bc94c579
Add help header and default type check in inputwdefault(numeric) · 9701de39
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@846 4c865b51-4357-4376-afb4-474e03ccb993
```
9701de39
Fixed gtGetSymmetryOperators and moved all symmetry operators functions to zUtil_Cryst · 140c7780
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@845 4c865b51-4357-4376-afb4-474e03ccb993
```
140c7780

Cell Operations/C-functions: ported all the C functions to operate also with... · b289a91b

Nicola Vigano authored 12 years ago

Cell Operations/C-functions: ported all the C functions to operate also with single precision floats

This should be bug free (tested against the regression tests / benchmarks) and give no decrease in speed.

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@843 4c865b51-4357-4376-afb4-474e03ccb993

b289a91b

Small reformatting · 2791c589

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@842 4c865b51-4357-4376-afb4-474e03ccb993

2791c589

C functions / Mean value: added single precision support · 8e0c31d5

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@841 4c865b51-4357-4376-afb4-474e03ccb993

8e0c31d5

SoftThresholding: optimized (SIMD/SSE vectorized) ST and added float version · 9e78cdd3

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@840 4c865b51-4357-4376-afb4-474e03ccb993

9e78cdd3

Python/mex compile: added -h option and colored error reporting · ebab400f

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@839 4c865b51-4357-4376-afb4-474e03ccb993

ebab400f

SoftThresholding/ Blobs: changed threshold to one only minimum per blob · 4195207c

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@838 4c865b51-4357-4376-afb4-474e03ccb993

4195207c

Forward Simulate : fix to save 'difspotID' into the sample.mat · dd9333fa

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@837 4c865b51-4357-4376-afb4-474e03ccb993

dd9333fa

gtStatus : add feedback from rec, cleaning a bit... · a29fd888

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@836 4c865b51-4357-4376-afb4-474e03ccb993

a29fd888

gtForwardSimulate_v2 : add 'save_grain' flag to save or not the grain_###.mat · 4ee9d24e

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

                       default is 'true'

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@835 4c865b51-4357-4376-afb4-474e03ccb993

4ee9d24e

gtRenderGrains : store grainids in 'hp' handle · 9dd06300

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@834 4c865b51-4357-4376-afb4-474e03ccb993

9dd06300