Commits · 76b2ba5d16701013dcb41c72d4bf7c3091e7673f · graintracking / DCT

Apr 28, 2013

zUtil_Twins : cleaning of the folder, updating some functions for the twin analysis · 76b2ba5d
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@720 4c865b51-4357-4376-afb4-474e03ccb993
```
76b2ba5d
zUtil_DataStructures : commented GtPhase and removed gtCreateGtSample · 19cfd39f
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@719 4c865b51-4357-4376-afb4-474e03ccb993
```
19cfd39f
fixing gtSetupForwardSimulation · 0c82efdc
Wolfgang Ludwig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@718 4c865b51-4357-4376-afb4-474e03ccb993
```
0c82efdc

DCT_Documentation : missing figure for OAR doc. · 4ccc2d0b

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@717 4c865b51-4357-4376-afb4-474e03ccb993

4ccc2d0b

Added parameters to optional input. · 8012d5cf
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@716 4c865b51-4357-4376-afb4-474e03ccb993
```
8012d5cf

Only formatting, indenting, cleaning... · e85fcaeb

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@715 4c865b51-4357-4376-afb4-474e03ccb993

e85fcaeb

Matrices and vectors search : removed unused functions, commented used functions · bac494d7
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@714 4c865b51-4357-4376-afb4-474e03ccb993
```
bac494d7
Conflicts : add useful grainid lists in '4_grains/out.mat' file to analyze the conflicts · d89f4f98
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@713 4c865b51-4357-4376-afb4-474e03ccb993
```
d89f4f98

gtINDEXDrawGrainUnitCells : set unit cell 'type' to... · 14c3a668

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

gtINDEXDrawGrainUnitCells : set unit cell 'type' to parameters.cryst(phaseid).crystal_system. If it is strange, hard coded to 'cubic'

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@712 4c865b51-4357-4376-afb4-474e03ccb993

14c3a668

GtGrainsManager : add method to display voxel details for grains in conflicts · 9b859a78
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@711 4c865b51-4357-4376-afb4-474e03ccb993
```
9b859a78

DataStructures : fix bug in GtSample.GtSample, GtSample.mergeSummaryField and... · 6310d8c4

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

DataStructures : fix bug in GtSample.GtSample, GtSample.mergeSummaryField and add method GtPhase.getGrainsWithFieldValueEqualsTo.

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@710 4c865b51-4357-4376-afb4-474e03ccb993

6310d8c4

DCT_Documentation : removed acronym OAR, add mOut environment for matlab... · a80a26de

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

DCT_Documentation : removed acronym OAR, add mOut environment for matlab Output text, removed OAR figures...

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@709 4c865b51-4357-4376-afb4-474e03ccb993

a80a26de

Conflicts : fill variable "difspotID" in sample.mat after forward simulation · 3e4e70ba

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

            formatting and bug fix in gtCreateGtSample
            add flag -v7.3 to savinf mat files
            initialize to [] conflicts fields in sample.mat

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@708 4c865b51-4357-4376-afb4-474e03ccb993

3e4e70ba

gtINDEXMatchGrains : fix bug to get list of grains in conflicts (variable 'pippo') · dec65a3d
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@707 4c865b51-4357-4376-afb4-474e03ccb993
```
dec65a3d

gtModifyStructure : bug fixing (handle string) · dd0134f3

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@706 4c865b51-4357-4376-afb4-474e03ccb993

dd0134f3

2nd step in reorganization of DCT_Documentation · a0b21f7b

Yoann Guilhem authored 12 years ago and

Nicola Vigano committed 11 years ago

- README.txt contains some guidelines (please read it!)
- added special commands to insert code
- introduced bibliography

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@705 4c865b51-4357-4376-afb4-474e03ccb993

a0b21f7b

Bugfix in gtCreateDoc · 46b5b739
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@704 4c865b51-4357-4376-afb4-474e03ccb993
```
46b5b739

1st step in reorganization of DCT_Documentation · bd9f32af

Yoann Guilhem authored 12 years ago and

Nicola Vigano committed 11 years ago

- improved Makefile
- common directory
- fixed layout
...

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@703 4c865b51-4357-4376-afb4-474e03ccb993

bd9f32af

Cleaning !!! · 45b4d976

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@702 4c865b51-4357-4376-afb4-474e03ccb993

45b4d976

DCT_Documentation : pictures needed for Setup and OAR. · e22784e6

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@701 4c865b51-4357-4376-afb4-474e03ccb993

e22784e6

gtCreateDoc can now focus on any specific source directories and/or files · 07c9d12f
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@700 4c865b51-4357-4376-afb4-474e03ccb993
```
07c9d12f

Update and format headers in zUtil_TomoUtils and zUtil_TIFF · d0f71dbb

Yoann Guilhem authored 12 years ago and

Nicola Vigano committed 11 years ago

Class definition files still need headers (GtSlideShow, GtGrainsManager and GtGuiSample)

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@699 4c865b51-4357-4376-afb4-474e03ccb993

d0f71dbb

gtResetAnalysis : useful function to reset an analysis directory to the raw... · 874eca80

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

gtResetAnalysis : useful function to reset an analysis directory to the raw data, ready to be re-analyzed!

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@698 4c865b51-4357-4376-afb4-474e03ccb993

874eca80

DCT_Documentation : done Setup, OAR chapters and added some features in... · e85b8f08

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago

DCT_Documentation : done Setup, OAR chapters and added some features in main.tex and user_manual.tex.

Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@697 4c865b51-4357-4376-afb4-474e03ccb993

e85b8f08

Some bugs fixed ... probably they have to be applied to the stable branch. · 2eccf199
Laura Nervo authored 12 years ago and Nicola Vigano committed 11 years ago
```
Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@696 4c865b51-4357-4376-afb4-474e03ccb993
```
2eccf199

Old and general formatting in the code... · c3fd9eb6

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@695 4c865b51-4357-4376-afb4-474e03ccb993

c3fd9eb6

New macro to output matlabDCT version and svn revision number · 282ce5da
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@693 4c865b51-4357-4376-afb4-474e03ccb993
```
282ce5da

bug fix · d4a014d2

Andrew King authored 12 years ago and

Nicola Vigano committed 11 years ago

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@692 4c865b51-4357-4376-afb4-474e03ccb993

d4a014d2

DCTuser_setup.sh now allows to choose between stable and development version · 8f81aae2
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@691 4c865b51-4357-4376-afb4-474e03ccb993
```
8f81aae2
Update gtCreateDoc function and bugfix for m2html · 5439a0ce
Yoann Guilhem authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@690 4c865b51-4357-4376-afb4-474e03ccb993
```
5439a0ce
Bug fix when saving parameters in setupFS, add edf info to get full image. AK · b65d4c8b
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@686 4c865b51-4357-4376-afb4-474e03ccb993
```
b65d4c8b

Error Handling fixed compiled usage, and possibly even windows usage · 2449bfcc

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@685 4c865b51-4357-4376-afb4-474e03ccb993

2449bfcc

Gui: added GtGuiSample to modify properties in sample.mat file. It is both... · bebd093f

Nicola Vigano authored 12 years ago

Gui: added GtGuiSample to modify properties in sample.mat file. It is both standalone and callable from GtGrainsManager

Squashed commit of the following:

commit 984bfed4b3963a57080b43a1be57846489ba2d3c
Author: Nicola Vigano <nicola.vigano@esrf.fr>
Date:   Mon Aug 6 21:04:58 2012 +0200

    GtGrainsManager: GtGuiSample hooked in. It is now called from button Info.

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

commit e6f7aed3d18b1b2c9bde38c928bfb410b321ac99
Author: Nicola Vigano <nicola.vigano@esrf.fr>
Date:   Mon Aug 6 20:50:22 2012 +0200

    Gui: Finished GtSample gui, with both possibility to use it standalone, and in other applications

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

commit d5bb2a9724470aa201f594e172c9bb8a780b1401
Author: Nicola Vigano <nicola.vigano@esrf.fr>
Date:   Mon Aug 6 02:01:16 2012 +0200

    GUI Sample Metadata: initial gui to ease modification of GtSample informantion

    Initial-readonly commit!

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@684 4c865b51-4357-4376-afb4-474e03ccb993

bebd093f

Gui: added GtSlideShow class (to view multiple images), and classes for... · 9587a318

Nicola Vigano authored 12 years ago

Gui: added GtSlideShow class (to view multiple images), and classes for joinable interfaces/display of lists

Squashed commit of the following:

commit b24355ee2ef49c41fce0b5de696da72640aa83e4
Author: Nicola Vigano <nicola.vigano@esrf.fr>
Date:   Tue Aug 7 01:18:53 2012 +0200

    Gui: GtSlideShow: added better selection of images (by index and list)

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

commit 7a04a43256ad45d4c385ed9c70aa1ff0f8773517
Author: Nicola Vigano <nicola.vigano@esrf.fr>
Date:   Tue Jul 31 20:14:10 2012 +0200

    GtSlideShow: added initial simple class to browse a folder content

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

commit 260ac1d304a2253afb4e5d4d3d8fdb7a86402066
Author: Nicola Vigano <nicola.vigano@esrf.fr>
Date:   Mon Aug 6 19:42:20 2012 +0200

    Gui: added list selector, based on joinable GUIs.

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

commit 0c400c19021df639de402e1c5b95519f9c15c8da
Author: Nicola Vigano <nicola.vigano@esrf.fr>
Date:   Mon Aug 6 19:41:36 2012 +0200

    Gui: added join-able GUI object (to act as a function that returns a value)

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@683 4c865b51-4357-4376-afb4-474e03ccb993

9587a318

Gui: Fixes for GtVolView and GtGrainsManager · 80bafa93

Nicola Vigano authored 12 years ago


Squashed commit of the following:

commit a02f3b11ebf53f6210dc27df0098de0edfb9d837
Author: Nicola Vigano <nicola.vigano@esrf.fr>
Date:   Mon Aug 6 21:04:10 2012 +0200

    GtGrainsManager: fixed empty Absorption volume file

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

commit c6ab1acfa06b1000c0e6742b298b1bc088df54ac
Author: Nicola Vigano <nicola.vigano@esrf.fr>
Date:   Mon Aug 6 01:59:46 2012 +0200

    GtVolView: added checks for bad volume filenames

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@682 4c865b51-4357-4376-afb4-474e03ccb993

80bafa93

Bug fix: detdiru and detdirv is now replicated to fit size. · 74a6476a
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@681 4c865b51-4357-4376-afb4-474e03ccb993
```
74a6476a
Added functions. · 3d7f7f4b
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@679 4c865b51-4357-4376-afb4-474e03ccb993
```
3d7f7f4b

Got rid of labgeo.rotcomp stored in the parameters file and used in functions... · 2513df17

Peter Reischig authored 12 years ago and

Nicola Vigano committed 11 years ago

Got rid of labgeo.rotcomp stored in the parameters file and used in functions - high risk of confusion when used with row and column vectors.

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@678 4c865b51-4357-4376-afb4-474e03ccb993

2513df17

Bug fix: corrected parameter name. · 5d8e7fa7
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@677 4c865b51-4357-4376-afb4-474e03ccb993
```
5d8e7fa7

SoftThresholding/C++ function: added handling of empty array as threshold (for crappy/faulty usage) · 5ae249f2

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@676 4c865b51-4357-4376-afb4-474e03ccb993

5ae249f2