Orientation-Sampling: reduced sampling strategies to two types: numpoints and resolution, each with and without ODF estimation

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

6D-Reconstructions: added a new detector data-fidelity term (KL), and two new TV-norms (Isotropic TV and Nuclear TV)

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

6D-Reconstructions: merged gtReconstructGrainExtended => gtReconstructGrainOrientation, gtReconstructGrainTwinCluster => gtReconstructGrainCluster

Code duplication reduced, and other small benefits

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

data-fidelity: l_2 -> KL
TV: l_1 -> l_{1,2}

But the old ones remain available, even if they are not accessible to the user

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

6D-reconstruction: updated to same volume_downscaling procedure as the other reconstruction routines

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

This reverts commit a3e9f983.

This reverts commit 4751df8e.

This reverts commit 44ee3120.

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

6D-Twin-Reconstruction: added support for importing shared included spots from parent in case the twin doesn't have them

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

This allows testing/debugging without waiting for the file-system to slowly do its job..

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

6D-Twin-reconstruction: fixed selection of twin blobs from parent's shared selection, and matching of the two

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

add possibility to look for SEG, ODF6D, VOL#D fields in gtFindFailedGrains
Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

causes systematic crashes of the OAR jobs..

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

added a switch to gtDisorientation in order to constrain solution to standard stereographic triangle or not
Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

into the standard triangle - adapt gtCrystTwinTest to this changes

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

Signed-off-by: preischig <preischig@gmail.com>

Signed-off-by: preischig <preischig@gmail.com>

Signed-off-by: preischig <preischig@gmail.com>

Signed-off-by: preischig <preischig@gmail.com>

Signed-off-by: preischig <preischig@gmail.com>

This also fixes a bug related to spots not selected in parent but selected
in twin

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>