remove automatic thresholding when launched as as a OAR job: it

causes systematic crashes of the OAR jobs..

Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

5_reconstruction/gtReconstructGrains.m

@@ -99,8 +99,10 @@ function gtReconstructGrains(first, last, workingdirectory, phaseID, parameters,
                     gtReconstructGrainOrientation(gr_id, phaseID, parameters);
                 end
         end
-        t.singleGrainAutoThreshold(phaseID, gr_id);
-        fprintf(repmat('\b', [1 num_chars]))
+        if (~isdeployed)
+            t.singleGrainAutoThreshold(phaseID, gr_id);
+            fprintf(repmat('\b', [1 num_chars]))
+        end
     end
     fprintf('Done (in %f seconds).\n', toc(c))