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fix: translation must take into account magnification

payno requested to merge fix_translations_reference into master

Otherwise pixel size and translation are into two different reference. Expected reference is the one of EBS-tomo (Bliss) like:

   | z
  /   x - beam
/ y


  • as x is parallel to the beam magnification will have to effect to it.
  • for EDF we don't have information regarding magnification. So this information must be given by the user (by editing the NXtomo output file)

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