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Fix pipeline writers

Pierre Paleo requested to merge fix_writers into master

About

This MR fixes the inconsistencies for pipeline writers.

Close #381 (closed)

To do

  • Update pipeline.WriterManager
  • Update/add individual writers in nabu.io.writer when necessary
  • Unit tests
  • End-to-end reconstruction test

Notes

  • Define one writer per file type, with the same API, as it was done by nabu.io.writer
  • Each writer can be backed by tomoscan volume
  • WriterManager does minimal things to assemble them and dispatch parameters
Edited by Pierre Paleo

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