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Created with Raphaël 2.2.017Dec1614121098543228Nov272625201514121092131Oct282320171098326Sep24221918168542129Aug28262522130Jul2922151022May75225Apr22212019181032131Mar27262413126319Feb131295329Jan281410617Dec16131110526Nov1487630Oct211198732130Sep19186530Aug2915952131Jul29252443128Jun2726251918121176543231May2924Python/Batch: fixed a few bugsGrainsMananger: fixed a few bugsFixed previous commitGrainsManager: Fixed bug with manual thresholding and shifts/bb6D-Reconstructions: added missing functions from a previous commitgtSetupReconstruction: load absorption volume only if needed6D-Reconstruction: cleaned code, fixed TVL1, and added kam and igm computationsDef-IGM: aded possibility to use another R_vector as averageDeformation: added functions to compute Kernel Average Misorientation and Intra-Granular Misorientation6D-Reconstruction: let's now trust FwdSim determination of volume size (with a small margin addition)6D-Reconstruction: restored TV-min and introduced LS (especially as a first step to bring in the feasibility region)GtGrainsAnalysis: mitigated re-shifting or re-shaping after initializationThresholding: fixed reset when changing perspectiveFwdSim: reverted previous commit and generalized fix for missing fields: detorig and detnormFwdSim: fixed missing detorig bugReconstruction: fixed a bug introduced with a previous fixReconstruction: fixed bug with blobs outside of the omega-rangeReplace imreconstruct to go fasterTwo changes connected with polychromatic indexing (g3d) fieldsFixed small bug in gtCheckParameters: missing input argument to get_default_sectionSmall bugfixes around Taper utils.FwdSim: small fix to cope with gtCheckParameters' buggy behaviorFwdSim: a few more small changesFwdSim: Changed name to a field to respect compatibility with PhantomGeneratorReconstruction: fixed small typoCleanup of folder 4_grainsForwardSimulation: first implementation of the likelihood based decision logicReconstruction: Added handling of defaults for 3DTV grain recs.GtGrainsManager: fixed updating of fields in Sample InfoCleaned GtGrainsAnalysis a bit.Updated a few functions to the new parameters/grains loading/saving functionsSample.mat: Removed from GtSample selected difspots and moved thresholds to GtPhaseGtGrainsAnalysis: fixed a few small things (mainly usage of sample.mat)Reverted gtFedPredictOmega and actually output even the NaNs (keeping track of them in the ondet variable)gtFedPredictOmega: trying to compensate numerical cancellationFixed previous commitOAR/GUI: fixed ordering and naming of arraysFwdSim: fixed bug for grains with few (=> 6) included spotsOrientationSampling: added information about the box size in degs6D-Reconstruction: fixed reconstructions with blobs at the w edge 360->0