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Created with Raphaël 2.2.021Jan19181715121143121Dec19141311107629Nov252421191813930Oct27252422191612115227Sep2625211514121110753131Aug30291817151412111095432131Jul29282726252422201918171614131211107654314Jun6230May15Mar1413976128Feb2320168124Jan2328Nov820Oct19Sep13Jul624Jun23201610420May19181723Apr124Feb27Jan17Dec16151413810Nov511Oct15Sep1310987326Aug242320195230Jul292826201962130Jun29232211743226May191716141312654329Apr2322212015109made BatchProcess as an option to gtLoGSetupsmall update for get_tomo_from_pctsmall updates to accomodate parameters.recgeo 2 structsmall updates for gtLoGSetup and get_spotsUpdates to speed up LoG based spot segmentationsmall update to make sure gtFixParameters work in gtSetupH5new update for gtSetupH5 adapting to the name changes with the marana detectorssmall update (flag was wrongly put to 0)Fix the bug for scancel user job in gtBatchProcessResetting change in gtDBSetupTables.Major update to the global fitting package (gtFITParameters): it can now handle multiphase samples phase-by-phase; omega motor encoder positions are used for improved accuracy; its parameters are saved and used from parameters.globalfit; saves figures as image files; improved logging of results and updating of parameters file; improved plotting and printing of results.revised from true to gtDBTableInfo(acq.name, false)Major update in indexing individual spots.gtINDEXMatchGrains_v3: minor change.gtIndexCompareGrainsSimple: new function; simple grain comparisonMinor changes.Friedel pair indexing: changed conditions for using the pairmatch.mat file instead of the database; cleaned code.Minor changes.approximate 3D-DCT grain volume intensity scaling (solve_conflict with intensity)minor updates to topotomo functionscreate intensity volume output for 3D-DCTenable absorption reconstruction with pixelsize different from voxelsizeminor fixesgtForwardSimulate_v2: redundant detector properties are recomputed to ensure they are up-to-date.gtLastFolderName: new function added to repo.gtLastFileName: minor changes.gtMathsOutliers: minor changes.gtGeoComputeExtraDetgeoProperties: adapted to the case of multiple detectors.Minor change in showing table info when setting up database tables.Commenting only.Added spacegroup "0" option for no symmetry and unlimited 180deg rotational freedom in the Rodrigues fundamental zone.Specified character encoding in handling files. This should avoid occasional corner cases, depending on the first image pixel value, where the file appears to be corrupted.add gtExportTomoView etcfix an error with gtFillVolsmall updatesmall update with GrainMapping_fun by adding gtCleanMapchange default min Comp to 0.2add option with DifSpotsDB for gtFillVolupdate gtSetupH5 to be automatic with different distortion and eyepiece for marana, add gtFixParameters to handle p.seg.write_sub_volumes and p.cryst.usedfamfix small error for GrainMapping_fun and add GrainMapping_assemble_DS