Commits · b6c6a3ef3df11cfa09cc9655cbfa49c1ae02660f · graintracking / DCT

Apr 28, 2013

Modification and addition of Rodrigues and other functions in zUtil_Cryst. · b6c6a3ef
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@351 4c865b51-4357-4376-afb4-474e03ccb993
```
b6c6a3ef
Update to geometry functions in zUtil_Maths (mainly for a speed up). · e3f04714
Peter Reischig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@350 4c865b51-4357-4376-afb4-474e03ccb993
```
e3f04714

Mex files for FED from Dimitris (hopefully last version) · b8526162

Laura Nervo authored 12 years ago and

Nicola Vigano committed 11 years ago


Signed-off-by: Laura Nervo <laura.nervo@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@349 4c865b51-4357-4376-afb4-474e03ccb993

b8526162

adapting ForwardSimulation to new indexter output · 1905e7ca
Wolfgang Ludwig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@348 4c865b51-4357-4376-afb4-474e03ccb993
```
1905e7ca

Compilation: added dependency checking before compilation and useful message reporting · c0a6530b

Nicola Vigano authored 12 years ago

It's possible to use gtGetFunctionDeps to get the chain of called functions from the test function

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@347 4c865b51-4357-4376-afb4-474e03ccb993

c0a6530b

OAR: got rid of readValue function · 3ee2b27f

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@346 4c865b51-4357-4376-afb4-474e03ccb993

3ee2b27f

Two files to work on crunch computer. Andy (with much help from Yoann) · 860243d2
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@345 4c865b51-4357-4376-afb4-474e03ccb993
```
860243d2

OAR: fixed removing well terminated jobs · 99a62873

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@344 4c865b51-4357-4376-afb4-474e03ccb993

99a62873

removed leftover from previous commit · f594db7e

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@343 4c865b51-4357-4376-afb4-474e03ccb993

f594db7e

formatted gtSetupForwardSimulation · bd7b757c

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@342 4c865b51-4357-4376-afb4-474e03ccb993

bd7b757c

Fixed Volume thresholding · 9e51cb56

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@341 4c865b51-4357-4376-afb4-474e03ccb993

9e51cb56

gtForwardSimulate_v2: better performance in computation. · 3bea1924

Nicola Vigano authored 12 years ago

Now the biggest limiting factor is disk access

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@340 4c865b51-4357-4376-afb4-474e03ccb993

3bea1924

submitOar: significant speedup with many jobs · 66f32301

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@339 4c865b51-4357-4376-afb4-474e03ccb993

66f32301

gtCreateGtSample: fixed mistake · 9fc34e3b

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@338 4c865b51-4357-4376-afb4-474e03ccb993

9fc34e3b

GtGrainsManager: added gui to segment and reconstruct in batch · aa9a6575

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@337 4c865b51-4357-4376-afb4-474e03ccb993

aa9a6575

Thresholding: added class to threshold volumes, and save them to file · 5656701c

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@336 4c865b51-4357-4376-afb4-474e03ccb993

5656701c

gtForwardSimulate: optimized some math (3x speedup), and cleaned some code · 1bf496b7

Nicola Vigano authored 12 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@335 4c865b51-4357-4376-afb4-474e03ccb993

1bf496b7

OAR: Speedup and clean of updateOar. · a505ddb5

Nicola Vigano authored 12 years ago

submitOar still needs to be updated against the new function to query oarstat, and then remove readValue

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@334 4c865b51-4357-4376-afb4-474e03ccb993

a505ddb5

adding setup scripts for Forward Simulation and Reconstruction process · 4f343bb8
Wolfgang Ludwig authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@333 4c865b51-4357-4376-afb4-474e03ccb993
```
4f343bb8
Bug fix in gtImgMedianFilter.c - thanks Nicola · 25b5085d
Andrew King authored 12 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@332 4c865b51-4357-4376-afb4-474e03ccb993
```
25b5085d
debugging new matching with Peter. · 2f81f3ac
Andrew King authored 13 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@331 4c865b51-4357-4376-afb4-474e03ccb993
```
2f81f3ac
Small modification in matching GUI functions. · 2f66b614
Peter Reischig authored 13 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@330 4c865b51-4357-4376-afb4-474e03ccb993
```
2f66b614
changes to gtForwardSimulation_v2.m - should work with new indexing output now · d6903982
Wolfgang Ludwig authored 13 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@329 4c865b51-4357-4376-afb4-474e03ccb993
```
d6903982
Import HST parameter file reader and writer · ddee4b85
Yoann Guilhem authored 13 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@328 4c865b51-4357-4376-afb4-474e03ccb993
```
ddee4b85

GtGrainsManager: added segmented volume visual and reconstruction per each grain · 92ee10ae

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@327 4c865b51-4357-4376-afb4-474e03ccb993

92ee10ae

OAR: fixed to not clash with the GUIs · ebc1c3c3

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@326 4c865b51-4357-4376-afb4-474e03ccb993

ebc1c3c3

Reconstruction: fixed Astra + OAR functions · 421a4c25

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@325 4c865b51-4357-4376-afb4-474e03ccb993

421a4c25

GtGrainsManager: fixed scrollbars in grain info visualization · 91a76ac3

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@324 4c865b51-4357-4376-afb4-474e03ccb993

91a76ac3

gtCopyCorrect: fixed file renaming · 0b406f64

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@323 4c865b51-4357-4376-afb4-474e03ccb993

0b406f64

gtPlaceSubVolume: added yet another possible behavior · 8b9cde0d

Nicola Vigano authored 13 years ago

It's now possible to both assign the single values of the volume, or just an index per each voxels

Passing an index == 0 will select the "copy volume values" behavior

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@322 4c865b51-4357-4376-afb4-474e03ccb993

8b9cde0d

Modified gtMathsIsPointInPloyhedron to accept multiple inputs. · 102969ea
Peter Reischig authored 13 years ago and Nicola Vigano committed 11 years ago
```
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@321 4c865b51-4357-4376-afb4-474e03ccb993
```
102969ea

GtGrainsManager: added 'up to date' check for the dilated volume · 1e900e23

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@320 4c865b51-4357-4376-afb4-474e03ccb993

1e900e23

gtPlaceSubVolume: formatted to make it more readable · f8d0b842

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@319 4c865b51-4357-4376-afb4-474e03ccb993

f8d0b842

gtPlaceSubVolume: extended C function to assignment, and updated interface · 014197e0

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@318 4c865b51-4357-4376-afb4-474e03ccb993

014197e0

Added class and methods for thresholding/segmentation of grains · f847ee65

Nicola Vigano authored 13 years ago


And wired it into GtGrainsManager

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@317 4c865b51-4357-4376-afb4-474e03ccb993

f847ee65

gtCrop: vectorized it a little bit, to make it more easy to change and mantain · 930079bf

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@316 4c865b51-4357-4376-afb4-474e03ccb993

930079bf

Pushed performance a little bit in gtMathsIsPointInPolyhedron · 077a33a4

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@315 4c865b51-4357-4376-afb4-474e03ccb993

077a33a4

GtGrainsManager: Added dilation control in Gui, and proper reloading · d8472c63

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@314 4c865b51-4357-4376-afb4-474e03ccb993

d8472c63

Queries: wired in the possibility to query the underlying 'sample' metadata structure · 5f01f10e

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@313 4c865b51-4357-4376-afb4-474e03ccb993

5f01f10e

Fixed a minor thing, and formatted code a little bit · 10278f6f

Nicola Vigano authored 13 years ago


Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@312 4c865b51-4357-4376-afb4-474e03ccb993

10278f6f