Commits · 9dbabb9f769551874d856bad50cbe659b4a7a794 · graintracking / DCT

May 01, 2018

Implemented initial support for datasets with multiple scans at different energies · 9dbabb9f

Nicola Vigano authored 6 years ago


This only supports handling them from the single grain reconstruction point of view, but it adds the infrastructure

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

9dbabb9f

Apr 18, 2018
- Renamed gtGetOmegaStepDeg -> gtAcqGetOmegaStep (and added unit support) · 07112c9d
  Nicola Vigano authored 6 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  07112c9d
- Updated parallel version of gtCalculateGrain to match the single R_vector version · 2832ddbc
  Nicola Vigano authored 6 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  2832ddbc
Apr 13, 2018
- Fixed some bugs from previous commits · d57629df
  Nicola Vigano authored 6 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  d57629df
Apr 09, 2018
- Fixed some inaccuracies and small bugs · 0b8f5f24
  Nicola Vigano authored 6 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  0b8f5f24
Apr 07, 2018
- Added synthetic topotomo dataset creation (and topotomo gtCalculateGrain) · fbfb2829
  Nicola Vigano authored 6 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  fbfb2829
Mar 03, 2018
- gtCalculateGrain: updated parallel version · 9c10f3d2
  Nicola Vigano authored 7 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  9c10f3d2
Jan 24, 2018
- Acquisition: first bunch of migration to gtAcqTotNumberOfImages · 7f2a1199
  Nicola Vigano authored 7 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  7f2a1199
Jan 19, 2018
- Acq: small fixed to account for multiple detectors and single acq field (should be changed) · b230a335
  Nicola Vigano authored 7 years ago and Nicola Vigano committed 7 years ago
  
  Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
  b230a335
Dec 13, 2017
- Correct for sample displacements (e.g. wrong ftomo expert setting...) · 4d0791d8
  Wolfgang Ludwig authored 7 years ago
  
  Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>
  4d0791d8
Nov 29, 2017
- add option for nearest neighbor interpolation to gtRotateVolume · b90b3d10
  Wolfgang Ludwig authored 7 years ago
  
  Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>
  b90b3d10
- a couple of minor fixes · 90bde551
  Wolfgang Ludwig authored 7 years ago
  
  Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>
  90bde551
Oct 20, 2017
- Grain segmentation: included new level-set based algorithm (off by default because more expensive) · 59f41074
  Nicola Vigano authored 7 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  59f41074
Oct 19, 2017
- 6D-Reconstruction: use each orientation's Lorentz factor · 7c0cf896
  Nicola Vigano authored 7 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  7c0cf896
Sep 21, 2017
- Minor fixes · 08125088
  Nicola Vigano authored 7 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  08125088
Jul 05, 2017
- small fixes · 3e0a59dd
  Wolfgang Ludwig authored 7 years ago
  
  Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>
  3e0a59dd
Jun 30, 2017
- Fixed small bugs in beam attenuation related scattering correction tools · bd4f2884
  Nicola Vigano authored 7 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  bd4f2884
Jun 23, 2017
- trying to merge changes...hope for the best · 6bb13683
  Wolfgang Ludwig authored 7 years ago
  
  Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>
  6bb13683
Jun 20, 2017
- Added border_mask control in the thresholding GUIs · c50ab721
  Nicola Vigano authored 7 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  c50ab721
- Thresholding: fixed wrong threshold with extended grains · f388862a
  Nicola Vigano authored 7 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  f388862a
Feb 22, 2017
- Grain-thresholding: added border masking · 3ec5e61f
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  3ec5e61f
Jan 13, 2017

Computing incoming beam intensity: improved and introduced a little bodge · 80da8878

Nicola Vigano authored 8 years ago


It seems that our estimation of the local beam intensity fails for some reason, so we produce the mean beam profile, and intensity, so then we smooth out some inconsistencies

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

80da8878

Improved and fixed computation of beam attenuation · dfd46664
Nicola Vigano authored 8 years ago
```
Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
```
dfd46664

Jan 09, 2017
- Added beam attenuation computation, due to absorption / fixed beam intensity profile computation · 419bcfb9
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  419bcfb9
Jan 06, 2017

Incoming beam intensity computation: improved function with initial support... · 295a1d1f

Nicola Vigano authored 8 years ago

Incoming beam intensity computation: improved function with initial support multiple detector geometries and better interpolation on detector

Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>

295a1d1f

Nov 30, 2016
- Thresholding: let's disable the std-dev weighting by default · 44334709
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  44334709
Nov 09, 2016
- Re-introduced Wolfgang's last feature for launching clusters on OAR (to-be-tested) · 1f17e496
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  1f17e496
- Grain segmentation: added logic that uses the reconstruction std-dev to reduce artifacts · 969bb255
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  969bb255
- 6D-Reconstructions: merged gtReconstructGrainExtended =>... · 6e09b613
  Nicola Vigano authored 8 years ago
  
  6D-Reconstructions: merged gtReconstructGrainExtended => gtReconstructGrainOrientation, gtReconstructGrainTwinCluster => gtReconstructGrainCluster Code duplication reduced, and other small benefits Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  6e09b613
- Revert "Enable reconstruction of twinclusters on OAR, using gtSetupReconstruction" · 3979e771
  Nicola Vigano authored 8 years ago
  
  This reverts commit a3e9f983.
  3979e771
Oct 12, 2016
- Enable reconstruction of twinclusters on OAR, using gtSetupReconstruction · a3e9f983
  Wolfgang Ludwig authored 8 years ago
  
  Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>
  a3e9f983
Oct 06, 2016

small fix in initialization of zero-array (does not accept logicals) · c89b3e4c

Wolfgang Ludwig authored 8 years ago

add possibility to look for SEG, ODF6D, VOL#D fields in gtFindFailedGrains
Signed-off-by: Wolfgang Ludwig <wolfgang.ludwig@esrf.fr>

c89b3e4c

Sep 12, 2016
- gtCalculateGrain: added plcry and plsamdef to output; commented · 2793ba06
  preischig authored 8 years ago
  
  Signed-off-by: preischig <preischig@gmail.com>
  2793ba06
Jun 13, 2016
- Random fixes from segmentation and assembling · 1bcd0dd3
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  1bcd0dd3
Jun 02, 2016
- Corrected typo · 1167fe02
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  1167fe02
- Small cosmetic change that helps with debugging · b89412e0
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  b89412e0
- gtGrainAllblobsFilterOrder: improved to reorder also fwd_sim data structure · e32e2db8
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  e32e2db8
May 11, 2016
- Orientation sampling / proj_geom: simplified and improved reuse of rotation tensors. · 0d3943c9
  Nicola Vigano authored 8 years ago
  
  Signed-off-by: Nicola Vigano <vigano@yoda.esrf.fr>
  0d3943c9
Mar 24, 2016
- gtCalculateGrain: postponing one permutation · b93d28d9
  Nicola Vigano authored 9 years ago
  
  Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  b93d28d9
Mar 08, 2016
- gtCalculateGrain: added detector restriction/selection · e1302573
  Nicola Vigano authored 9 years ago
  
  (untested) Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
  e1302573