Rework the project with pyproject.toml

.gitlab-ci.yml

@@ -9,7 +9,7 @@ test:
     - eval "$(/opt/conda/bin/conda shell.posix hook)"  # Enable activate/deactivate
     - mamba create --name=test python=3.10 pytango
     - conda activate test
-    - pip install .[test] nosqltangodb pytest mock
+    - pip install .[test]
   script:
     - pytest tests -s
 variables:

README.md

+# SampleChanger
+
+Handles the sample changer robot for micro tomography.
+
+The robot can be installed on different tomgraphy end stations and aligns
+itself with the set-up used.
+
+## Robot controller
+
+The class can use few controllers from the [StaubLink project](https://gitlab.esrf.fr/watier/StaubLink).
+to handle all functionality of the robot.
+
+- `id19Controller.py`
+- `bm05Controller2.py`
+
+## TomoSampleChanger
+
+The TomoSampleChanger have to be defined with the following properties.
+
+- `robot_controller`: One of `bm05` or `id19`
+- `robot_host`: The host name or IP of the robot

pyproject.toml

+[build-system]
+# Minimum requirements for the build system to execute.
+requires = ["setuptools>=61.0", "wheel"]  # PEP 508 syntax
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "samplechanger"
+version = "0.2.0"
+authors = [
+  { name="Clemence Muzelle", email="clemence.muzelle@esrf.fr" },
+]
+description = "Sample changer software"
+requires-python = ">=3.8"
+classifiers = [
+    "Development Status :: 2 - Pre-Alpha",
+    "Intended Audience :: Developers",
+    "Natural Language :: English",
+    "Programming Language :: Python :: 3",
+    "License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)",
+]
+license = {text = "GNU Lesser General Public License v3"}
+readme = "README.md"
+
+dependencies = []
+
+[project.optional-dependencies]
+dev = ["black"]
+test = ["pytest", "pytest-mock", "nosqltangodb"]
+
+[project.scripts]
+TomoSampleChanger = "samplechanger.sample_changer_ds.TomoSampleChanger:main"
+TomoSamples = "samplechanger.samples_ds.TomoSamples:main"
+
+[project.urls]
+"Homepage" = "https://gitlab.esrf.fr/bliss/sample_changer"
+"Bug Tracker" = "https://gitlab.esrf.fr/bliss/sample_changer/issues"
+
+[tool.flake8]
+# Check that this is aligned with your other tools like Black
+max-line-length = 120
+exclude = [
+    # No need to traverse our git directory
+    ".git",
+    # There's no value in checking cache directories
+    "__pycache__"
+]
+# Use extend-ignore to add to already ignored checks which are anti-patterns like W503.
+extend-ignore = [
+    # PEP 8 recommends to treat : in slices as a binary operator with the lowest priority, and to leave an equal
+    # amount of space on either side, except if a parameter is omitted (e.g. ham[1 + 1 :]).
+    # This behaviour may raise E203 whitespace before ':' warnings in style guide enforcement tools like Flake8.
+    # Since E203 is not PEP 8 compliant, we tell Flake8 to ignore this warning.
+    # https://black.readthedocs.io/en/stable/the_black_code_style/current_style.html#slices
+    "E203"
+]
\ No newline at end of file

setup.py

-# -*- coding: utf-8 -*-
+import setuptools
 
-"""The setup script."""
-
-import sys
-from setuptools import setup, find_packages
-
-TESTING = any(x in sys.argv for x in ['test', 'pytest'])
-
-with open('README.rst') as readme_file:
-    readme = readme_file.read()
-
-requirements=[]
-
-setup_requirements = ['pytest-runner', 'pytest'] if TESTING else []
-
-test_requirements = ['pytest-cov', 'pytest', 'mock', 'nosqltangodb']
-
-setup(
-    author="Clemence Muzelle",
-    author_email='clemence.muzelle@esrf.fr',
-    classifiers=[
-        'Development Status :: 2 - Pre-Alpha',
-        'Intended Audience :: Developers',
-        'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)',
-        'Natural Language :: English',
-        "Programming Language :: Python :: 2",
-        'Programming Language :: Python :: 2.7',
-        'Programming Language :: Python :: 3',
-        'Programming Language :: Python :: 3.6',
-    ],
-    description="Sample changer software",
-    install_requires=requirements,
-    license="GNU Lesser General Public License v3",
-    long_description=readme,
-    include_package_data=True,
-    keywords='samplechanger',
-    name='samplechanger',
-    package_dir={"": "src"},
-    setup_requires=setup_requirements,
-    test_suite='tests',
-    tests_require=test_requirements,
-    url='https://gitlab.esrf.fr/bliss/sample_changer',
-    version='0.1.0',
-    zip_safe=False,
-    entry_points={
-        'console_scripts': [
-            'TomoSampleChanger = samplechanger.sample_changer_ds.TomoSampleChanger:main',
-            'TomoSamples = samplechanger.samples_ds.TomoSamples:main',
-        ]
-    }
-)
+setuptools.setup()