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Refactoring and fixes

Marcus Oskarsson requested to merge gh-22976785/261/mxcube/refactoring_and_fixes into master

Created by: mguijarr

Here are a few fixes and some refactoring. See commits messages for more details.

Highlight: I set up an exception handler so we don't need to do try...except in all our routes, and I changed the code in routes accordingly.

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