PEP8

est/app/canvas_launcher/__init__.py

-from .launcher import Launcher
+from .launcher import Launcher  # noqa

est/app/process.py

@@ -7,14 +7,13 @@ from ewoksorange.owsconvert import ows_to_ewoks
 from .utils import get_unit
 from .utils import get_url
 from .utils import convert_spectra_dims
-from .utils import get_xas_obj
 
 try:
-    import h5py
-
-    has_h5py = True
-except:
+    import h5py  # noqa
+except ImportError:
     has_h5py = False
+else:
+    has_h5py = True
 
 logging.basicConfig(level=logging.DEBUG)
 _logger = logging.getLogger(__name__)

est/app/test/test_exec.py

@@ -37,7 +37,7 @@ from est.io.utils.information import InputInformation
 from silx.io.url import DataUrl
 
 try:
-    import PyMca5
+    import PyMca5  # noqa
 except ImportError:
     has_pymca = False
 else:

est/app/utils/__init__.py

@@ -32,18 +32,19 @@ from silx.io.url import DataUrl
 from est.units import ur
 from est.core.types import Dim
 from est.io.utils import get_data
-from est.core.types import Spectrum, XASObject
+from est.core.types import XASObject
 from est.core.io import read_xas
 from est.io.utils.information import InputInformation
 import logging
 from est import settings
 
 try:
-    from est.io.utils.spec import read_spectrum
-
-    has_read_spectrum = True
+    from est.io.utils.spec import read_spectrum  # noqa
 except ImportError:
     has_read_spectrum = False
+else:
+    has_read_spectrum = True
+
 _logger = logging.getLogger(__name__)
 
 

est/core/io.py

@@ -33,7 +33,7 @@ from est.io import read_xas, write_xas, get_xasproc
 from est.core.types import XASObject
 from silx.io.url import DataUrl
 from est.core.types import Dim
-from est.units import ur, convert_to
+from est.units import ur
 from typing import Union
 from est.io.utils.information import InputInformation
 import h5py

est/core/process/energyroi.py

@@ -27,12 +27,8 @@ __authors__ = ["H. Payno"]
 __license__ = "MIT"
 __date__ = "27/01/2021"
 
-from est.core.types import XASObject
 from .process import Process
-from est.core.process.process import _input_desc
-from est.core.process.process import _output_desc
 import logging
-from typing import Union
 
 _logger = logging.getLogger(__name__)
 

est/core/process/io.py

@@ -30,8 +30,6 @@ __date__ = "06/11/2019"
 
 from .process import Process
 from est.core.types import XASObject
-from est.core.process.process import _input_desc
-from est.core.process.process import _output_desc
 from est.io.utils.information import InputInformation
 import pkg_resources
 

est/core/process/larch/autobk.py

@@ -27,8 +27,6 @@
 from est.core.types import Spectrum, XASObject
 from est.core.process.process import Process
 from est.core.process.process import _NexusDatasetDef
-from est.core.process.process import _input_desc
-from est.core.process.process import _output_desc
 from larch.xafs.autobk import autobk
 import multiprocessing
 import functools

est/core/process/larch/mback.py

@@ -27,8 +27,6 @@
 from est.core.types import Spectrum, XASObject
 from est.core.process.process import Process
 from est.core.process.process import _NexusDatasetDef
-from est.core.process.process import _input_desc
-from est.core.process.process import _output_desc
 from larch.xafs.mback import mback
 import multiprocessing
 import functools
@@ -93,7 +91,7 @@ def process_spectr_mback(
     ):
         if opt_name in _conf:
             opts[opt_name] = _conf[opt_name]
-    if not "z" in opts:
+    if "z" not in opts:
         raise ValueError("atomic number of the absorber is not specify")
 
     if _DEBUG is True:

est/core/process/larch/mback_norm.py

@@ -27,8 +27,6 @@
 from est.core.types import Spectrum, XASObject
 from est.core.process.process import Process
 from est.core.process.process import _NexusDatasetDef
-from est.core.process.process import _input_desc
-from est.core.process.process import _output_desc
 from larch.xafs.mback import mback_norm
 from larch.xafs.pre_edge import preedge
 import multiprocessing

est/core/process/larch/pre_edge.py

@@ -27,8 +27,6 @@
 from est.core.types import Spectrum, XASObject
 from est.core.process.process import Process
 from est.core.process.process import _NexusSpectrumDef, _NexusDatasetDef
-from est.core.process.process import _input_desc
-from est.core.process.process import _output_desc
 from est.core.utils.symbol import MU_CHAR
 from larch.xafs.pre_edge import pre_edge
 import multiprocessing

est/core/process/larch/test/test_autobk.py

@@ -34,7 +34,7 @@ import urllib.request
 from est.core.types import Spectrum, XASObject
 
 try:
-    import larch
+    import larch  # noqa
 except ImportError:
     has_larch = False
 else:

est/core/process/larch/test/test_mback.py

@@ -34,7 +34,7 @@ import urllib.request
 from est.core.types import Spectrum, XASObject
 
 try:
-    import larch
+    import larch  # noqa
 except ImportError:
     has_larch = False
 else:

est/core/process/larch/test/test_mback_norm.py

@@ -34,7 +34,7 @@ import urllib.request
 from est.core.types import Spectrum, XASObject
 
 try:
-    import larch
+    import larch  # noqa
 except ImportError:
     has_larch = False
 else:

est/core/process/larch/test/test_pre_edge.py

@@ -34,7 +34,7 @@ import urllib.request
 from est.core.types import Spectrum, XASObject
 
 try:
-    import larch
+    import larch  # noqa
 except ImportError:
     has_larch = False
 else:

est/core/process/larch/test/test_workflow.py

@@ -35,12 +35,12 @@ import numpy
 from est.core.types import Spectrum
 
 try:
-    import larch
+    import larch  # noqa
 except ImportError:
     has_larch = False
 else:
     has_larch = True
-    from est.core.process.larch.xftf import larch_xftf, process_spectr_xftf as xftf
+    from est.core.process.larch.xftf import process_spectr_xftf as xftf
     from est.core.process.larch.autobk import process_spectr_autobk as autobk
     from est.core.process.larch.pre_edge import process_spectr_pre_edge as pre_edge
     from est.io.utils.larch import read_ascii

est/core/process/larch/test/test_xftf.py

@@ -34,7 +34,7 @@ import urllib.request
 from est.core.types import Spectrum, XASObject
 
 try:
-    import larch
+    import larch  # noqa
 except ImportError:
     has_larch = False
 else:

est/core/process/larch/xftf.py

@@ -28,8 +28,6 @@ from est.core.types import Spectrum, XASObject
 from est.core.process.process import Process
 from est.core.process.process import _NexusSpectrumDef
 from est.core.process.process import _NexusDatasetDef
-from est.core.process.process import _input_desc
-from est.core.process.process import _output_desc
 from larch.xafs.xafsft import xftf
 from est.core.utils.symbol import ANGSTROM_CHAR
 import multiprocessing

est/core/process/noise.py

@@ -29,8 +29,6 @@ __date__ = "18/01/2021"
 
 from est.core.types import XASObject
 from est.core.types import Spectrum
-from est.core.process.process import _input_desc
-from est.core.process.process import _output_desc
 from .process import Process
 from .process import _NexusSpectrumDef
 from .process import _NexusDatasetDef
@@ -40,7 +38,6 @@ import numpy
 import pkg_resources
 import multiprocessing
 import functools
-from typing import Union
 
 _logger = logging.getLogger(__name__)
 
@@ -80,21 +77,21 @@ def process_noise_savgol(
     )
     if "noise" in configuration:
         configuration = configuration["noise"]
-    if not "window_size" in configuration:
+    if "window_size" not in configuration:
         raise ValueError("`window_size` should be specify. Missing in configuration")
     else:
         window_size = configuration["window_size"]
-    if not "polynomial_order" in configuration:
+    if "polynomial_order" not in configuration:
         raise ValueError(
             "`polynomial_order` should be specify. Missing in configuration"
         )
     else:
         polynomial_order = configuration["polynomial_order"]
-    if not "e_min" in configuration:
+    if "e_min" not in configuration:
         e_min = None
     else:
         e_min = configuration["e_min"]
-    if not "e_max" in configuration:
+    if "e_max" not in configuration:
         e_max = None
     else:
         e_max = configuration["e_max"]

est/core/process/process.py

@@ -124,13 +124,6 @@ class _NexusSpectrumDef:
     def title_latex(self):
         return self.__title_latex
 
-    @title.setter
-    def title_latex(self, title):
-        if not isinstance(title, (str, type(None))):
-            raise TypeError("`title` should be an instance of str or None")
-        else:
-            self.__title_latex = title
-
 
 class _NexusDatasetDef:
     """Util function to define a Nexus plot"""