Commits · paganin2020 · tomotools / Nabu

View open merge request

04 Nov, 2020 1 commit
- added documentation and non regression test · 2a53ee8c
  myron authored Nov 04, 2020
  
  2a53ee8c
13 Oct, 2020 2 commits
- removed the filter calculation from the base class · 7d72d921
  myron authored Oct 13, 2020
  
  7d72d921
- Added Paganin2020 by using inheritance schemes · be37f31e
  myron authored Oct 13, 2020
  
  be37f31e
08 Oct, 2020 29 commits
- Merge branch 'half_tomo_cor_preproc' into 'master' · 4a159813
  Pierre Paleo authored Oct 08, 2020
```
Half tomo: auto-CoR

See merge request !59
```
  4a159813
- added filtering in the cost function. It can be (de)activted with the... · e21b70cc
  myron authored Oct 01, 2020
```
added filtering in the cost function. It can be (de)activted with the filtered_cost argument which defaults to True
```
  e21b70cc
- resources.cor: use CenterOfRotationAdaptiveSearch · 088436c3
  Pierre Paleo authored Oct 01, 2020
  
  088436c3
- Update validator for auto-CoR · 596e5039
  Pierre Paleo authored Oct 01, 2020
  
  596e5039
- Ready for MR · 7f5957db
  myron authored Oct 01, 2020
  
  7f5957db
- it works correctly · 3e1056f2
  myron authored Oct 01, 2020
  
  3e1056f2
- break · 3470f4fd
  myron authored Oct 01, 2020
  
  3470f4fd
- restructured OK · 67a91dd5
  myron authored Oct 01, 2020
  
  67a91dd5
- got it to work as separate method · f2faf172
  myron authored Oct 01, 2020
  
  f2faf172
- addes a missing self. calling basic_find_shift_ · 95afe1fc
  myron authored Sep 29, 2020
  
  95afe1fc
- restructured out the global search nesting · e3063fe1
  myron authored Sep 29, 2020
  
  e3063fe1
- dataset_validator: bugfix · fbf0b4a0
  Pierre Paleo authored Sep 29, 2020
  
  fbf0b4a0
- dataset_validator: update error message · ea7bf49f
  Pierre Paleo authored Sep 29, 2020
  
  ea7bf49f
- Use [0, 360] default angles for half tomo when no info on angles was provided · 1563ab5c
  Pierre Paleo authored Sep 29, 2020
  
  1563ab5c
- Integrate new auto-Cor method in pipeline and resources · c04d7f14
  Pierre Paleo authored Sep 29, 2020
  
  c04d7f14
- preproc.alignment: import formatting · 187e876b
  Pierre Paleo authored Sep 29, 2020
  
  187e876b
- preproc.alignment: Bugfix when not having scipy · e6e2cf40
  Pierre Paleo authored Sep 29, 2020
  
  e6e2cf40
- Apply black -l 128 on files · bb7390cd
  Pierre Paleo authored Sep 28, 2020
  
  bb7390cd
- corrected a possible black.py generated artefact · bed0fd0f
  myron authored Sep 28, 2020
  
  bed0fd0f
- Reactivated the cache mechanism for hal_tomo syntetic data creation · 992836d7
  myron authored Sep 28, 2020
  
  992836d7
- Added Cor search with limits in tests. Changed merit function for CoR: no log · 35acfb7b
  myron authored Sep 28, 2020
  
  35acfb7b
- refined the selection of the best ROI · 882c2091
  myron authored Sep 25, 2020
  
  882c2091
- added documentation for global search · b2794cf5
  myron authored Sep 25, 2020
  
  b2794cf5
- black · a1ae1f9d
  myron authored Sep 25, 2020
  
  a1ae1f9d
- Test with global search for half tomo passes · 747d9e61
  myron authored Sep 25, 2020
  
  747d9e61
- reinitialise the dataset on the CDI · ad8562e5
  myron authored Jul 21, 2020
  
  ad8562e5
- black applied · abcb43a9
  myron authored Jul 21, 2020
  
  abcb43a9
- Tests are OK · 5c365cba
  myron authored Jul 21, 2020
  
  5c365cba
- created dataset · e41dc896
  myron authored Jul 17, 2020
  
  e41dc896
29 Sep, 2020 2 commits
- Merge branch 'nabu_from_tomwer' into 'master' · d5eb5513
  Pierre Paleo authored Sep 29, 2020
```
LocalReconstruction: propagate cuda_options to pipeline class

See merge request !78
```
  d5eb5513
- LocalReconstruction: propagate cuda_options to pipeline class · a3a0ed94
  Pierre Paleo authored Sep 29, 2020
  
  a3a0ed94
28 Sep, 2020 1 commit
- Merge branch 'multivol_histogram' into 'master' · c85a0e35
  Pierre Paleo authored Sep 28, 2020
```
Multi-volumes histogram

See merge request !77
```
  c85a0e35
25 Sep, 2020 5 commits
- Truncate bins after computation · d9db6777
  Pierre Paleo authored Sep 25, 2020
  
  d9db6777
- Dont use both size_GB and size_slices (2) · 42520dd9
  Pierre Paleo authored Sep 25, 2020
  
  42520dd9
- Dont use both size_GB and size_slices · f63768be
  Pierre Paleo authored Sep 25, 2020
  
  f63768be
- Remove duplicate logger · 60911567
  Pierre Paleo authored Sep 25, 2020
  
  60911567
- Add _histogram suffix when dumping histogram to a new file · f706f9c2
  Pierre Paleo authored Sep 25, 2020
  
  f706f9c2