Commits · master · tomotools / Nabu

11 Sep, 2020 13 commits
- Merge branch 'sino_normalization' into 'master' · 7e7842db
  Pierre Paleo authored Sep 11, 2020
```
Sinogram normalization

Closes #118

See merge request !73
```
  7e7842db
- Normalize sinos on host in limited memory settings · 9aede52e
  Pierre Paleo authored Sep 11, 2020
  
  9aede52e
- Integrate sino normalization into (Cuda)FullFieldPipeline · f63b60d5
  Pierre Paleo authored Sep 11, 2020
  
  f63b60d5
- FullField: fix Histogram class · b3ddb6e5
  Pierre Paleo authored Sep 11, 2020
  
  b3ddb6e5
- Fix pycuda numpy.int instead of int · aa8d8d2d
  Pierre Paleo authored Sep 11, 2020
  
  aa8d8d2d
- Fix n_slices = 0 bug · ece7cbb5
  Pierre Paleo authored Sep 11, 2020
  
  ece7cbb5
- Integrate sino normalization in config and process_config · 70137a2a
  Pierre Paleo authored Sep 11, 2020
  
  70137a2a
- Add unit test for sino normalization · 9207974f
  Pierre Paleo authored Sep 11, 2020
  
  9207974f
- SinoNormalization: fix coeff subtraction · 80f835e1
  Pierre Paleo authored Sep 11, 2020
  
  80f835e1
- CudaSinoNormalization: fix grid and block · ff968218
  Pierre Paleo authored Sep 11, 2020
  
  ff968218
- cuda sino normalization: fix indices · 37489777
  Pierre Paleo authored Sep 11, 2020
  
  37489777
- Cuda fix · 3471935e
  Pierre Paleo authored Sep 11, 2020
  
  3471935e
- Import fix · 16bac729
  Pierre Paleo authored Sep 11, 2020
  
  16bac729
10 Sep, 2020 6 commits
- Add normalization.cu · f0329bd4
  Pierre Paleo authored Sep 10, 2020
  
  f0329bd4
- Start CudaSinoNormalization · 5df41e3b
  Pierre Paleo authored Sep 10, 2020
  
  5df41e3b
- Bugfix SinoNormalization · a0fe2cd6
  Pierre Paleo authored Sep 10, 2020
  
  a0fe2cd6
- Start SinoNormalization · b7029429
  Pierre Paleo authored Sep 10, 2020
  
  b7029429
- Merge branch 'histogram' into 'master' · e8e0c080
  Pierre Paleo authored Sep 10, 2020
```
Histogram computation

See merge request !72
```
  e8e0c080
- Bugfix: use relative file paths · ebf4ed65
  Pierre Paleo authored Sep 10, 2020
  
  ebf4ed65
09 Sep, 2020 7 commits
- Merge histograms in HDF5 master file · e1463819
  Pierre Paleo authored Sep 09, 2020
  
  e1463819
- Move hist_as_2Darray from utils to misc.histogram · aa13ac96
  Pierre Paleo authored Sep 09, 2020
  
  aa13ac96
- app.FullField: more flexible get_process_name · aa5afb2e
  Pierre Paleo authored Sep 09, 2020
  
  aa5afb2e
- LocalReconstruction: WIP add merge_histograms · 908b93bd
  Pierre Paleo authored Sep 09, 2020
  
  908b93bd
- io.reader: formatting · 3bd56303
  Pierre Paleo authored Sep 09, 2020
  
  3bd56303
- histogram: add_last_bin · e14a878a
  Pierre Paleo authored Sep 09, 2020
  
  e14a878a
- ProcessConfig: do histogram only if HDF5 output · 099de777
  Pierre Paleo authored Sep 09, 2020
  
  099de777
08 Sep, 2020 14 commits
- io.NXProcessWriter: dont delete whole entry, only NXProcess · 91db5d1e
  Pierre Paleo authored Sep 08, 2020
  
  91db5d1e
- Write histogram only for HDF5 output · 92f9a12a
  Pierre Paleo authored Sep 08, 2020
  
  92f9a12a
- app.FullField: write histogram in HDF5 file · 0b953206
  Pierre Paleo authored Sep 08, 2020
  
  0b953206
- Integrate histogram in LimitedMemory · e6ee4d60
  Pierre Paleo authored Sep 08, 2020
  
  e6ee4d60
- utils: add hist_as_2Darray · 22786a7e
  Pierre Paleo authored Sep 08, 2020
  
  22786a7e
- Integrate histogram in (Cuda)FullFieldPipeline · b15aea37
  Pierre Paleo authored Sep 08, 2020
  
  b15aea37
- processconfig: integrate histogram · 74d001b9
  Pierre Paleo authored Sep 08, 2020
  
  74d001b9
- app.FullFieldPipeline: start integrating histogram · 66a625ab
  Pierre Paleo authored Sep 08, 2020
  
  66a625ab
- config: validate new section missing from user config file · b8b7b2de
  Pierre Paleo authored Sep 08, 2020
  
  b8b7b2de
- Add unit test · 00863c65
  Pierre Paleo authored Sep 08, 2020
  
  00863c65
- Fix unused imports · d38416b9
  Pierre Paleo authored Sep 08, 2020
  
  d38416b9
- io.config: handle new sections · 2b13db1c
  Pierre Paleo authored Sep 08, 2020
  
  2b13db1c
- nabu_config: create a new dedicated section postproc · 64ec2617
  Pierre Paleo authored Sep 08, 2020
  
  64ec2617
- Integrate histogram in nabu config · 65de400d
  Pierre Paleo authored Sep 08, 2020
  
  65de400d