Commits · doc_for_alignment · tomotools / Nabu

26 Jun, 2020 23 commits
- Added doc for detector translation · 0138e8a4
  myron authored Jun 26, 2020
  
  0138e8a4
- added python notebook · ad876173
  myron authored Jun 26, 2020
  
  ad876173
- doc for alignment · 191203d2
  myron authored Jun 26, 2020
  
  191203d2
- Fix typo · 1d53ff4b
  Pierre Paleo authored Jun 26, 2020
  
  1d53ff4b
- Make scipy optional for tests · a0eb6913
  Pierre Paleo authored Jun 26, 2020
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scipy should not be a nabu dependency
```
  a0eb6913
- Update release month · 384f81ce
  Pierre Paleo authored Jun 25, 2020
  
  384f81ce
- Doc: update index · c17b5a0c
  Pierre Paleo authored Jun 25, 2020
  
  c17b5a0c
- Update features with warning for CCDCorrection · a06539f3
  Pierre Paleo authored Jun 25, 2020
  
  a06539f3
- Update quickstart · e902a87d
  Pierre Paleo authored Jun 25, 2020
  
  e902a87d
- Doc: Add about and v2020.2.0 · 5097a3d0
  Pierre Paleo authored Jun 25, 2020
  
  5097a3d0
- Bugfix · e46f57ca
  Pierre Paleo authored Jun 25, 2020
  
  e46f57ca
- Bugfix · 7a356d7c
  Pierre Paleo authored Jun 25, 2020
  
  7a356d7c
- Update doc version · 0d736f4a
  Pierre Paleo authored Jun 25, 2020
  
  0d736f4a
- Update API doc · 4775e682
  Pierre Paleo authored Jun 25, 2020
  
  4775e682
- Update changelog · 24215b5d
  Pierre Paleo authored Jun 25, 2020
  
  24215b5d
- app.reconstruct: Check z-region for reconstruction · e2628155
  Pierre Paleo authored Jun 24, 2020
  
  e2628155
- cli: Add --slice constraint · 382efabc
  Pierre Paleo authored Jun 22, 2020
  
  382efabc
- Config: Set default phase method to none · 58f49172
  Pierre Paleo authored Jun 22, 2020
  
  58f49172
- Add new test for multiple flatfield · 857aac85
  Pierre Paleo authored Jun 22, 2020
  
  857aac85
- Rewrite CudaFlatField · f55e6f1e
  Pierre Paleo authored Jun 22, 2020
  
  f55e6f1e
- Add reverse dict for flats indices · 460e2f34
  Pierre Paleo authored Jun 22, 2020
  
  460e2f34
- Lift max_flats=2 limit · b6558f1d
  Pierre Paleo authored Jun 22, 2020
  
  b6558f1d
- Rewrite cuda flatfield kernel · 1db95e77
  Pierre Paleo authored Jun 22, 2020
  
  1db95e77
25 Jun, 2020 2 commits
- DetectorTranslationAlongBeam: return complete list of shifts (with initial zeros) · 5b605233
  Nicola Vigano authored Jun 25, 2020
```
Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
```
  5b605233
- Merge branch 'translate_alignxc' into 'master' · 0535ee49
  Pierre Paleo authored Jun 25, 2020
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Shift finding for translation stage along beam

See merge request !41
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  0535ee49
24 Jun, 2020 8 commits
- Alignment: extended doctstring of DetectorTranslationAlongBeam.find_shift · 118f2120
  Nicola Vigano authored Jun 24, 2020
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Simplified initial description, and extended examples
Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  118f2120
- Alignment - Fourier filters: fixed rfft filter shape · 712bfbf3
  Nicola Vigano authored Jun 24, 2020
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The filter shape is computed according to scipy.fft.rfftn recommendations
Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  712bfbf3
- Alignment: remove unused parameter · 4162b048
  Nicola Vigano authored Jun 24, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  4162b048
- Alignment: allow specifying Fourier filter type and shape · dfda1469
  Nicola Vigano authored Jun 24, 2020
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This allows to automatically create filters that are compatible with rfft
Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  dfda1469
- reduced the noise in the noisy test because with float32 the ffts are more fragiles · c8ddff07
  myron authored Jun 24, 2020
  
  c8ddff07
- make sure that the filter does not change the default data_type · 406955aa
  myron authored Jun 24, 2020
  
  406955aa
- set default data type to np.float32 · 3a1bfdd8
  myron authored Jun 24, 2020
  
  3a1bfdd8
- Using scipy.fft.rfft if available · 00a34bc6
  myron authored Jun 24, 2020
  
  00a34bc6
23 Jun, 2020 4 commits
- Alignment: fixed fitting of Detector translation, due to first element having to being 0 · 98536e60
  Nicola Vigano authored Jun 23, 2020
```
Thanks Christian for spotting this
Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
```
  98536e60
- added a synthetic test/example and completed the doc. · 08326b6e
  myron authored Jun 23, 2020
  
  08326b6e
- Alignment: fixed shifts in test · 284b7138
  Nicola Vigano authored Jun 23, 2020
```
Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  284b7138
- Alignment: fixed bug due to out-dated variable content · 37713ab9
  Nicola Vigano authored Jun 23, 2020
```
Thanks Alessandro for spotting this
Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  37713ab9
22 Jun, 2020 2 commits
- Alignment: added plotting and moved properties in base class · 081c272b
  Nicola Vigano authored Jun 22, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  081c272b
- Merge branch 'cor_app' into 'master' · ca596003
  Pierre Paleo authored Jun 22, 2020
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CoR application

Closes #114

See merge request !46
```
  ca596003
21 Jun, 2020 1 commit
- Alignment: added 1d peak regions extraction along a given axis, from 2d images · dd0f5109
  Nicola Vigano authored Jun 21, 2020
```
Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
```
  dd0f5109