Commits · 4aefb158e28db64640fa900588b27ac898661562 · tomotools / Nabu · GitLab

18 Jun, 2020 6 commits
- optional return argument for shifts. Reference shifts given by bootstrap. · 4aefb158
  myron authored Jun 18, 2020
  
  4aefb158
- Alignment: small restyling · 7d9d43aa
  Nicola Vigano authored Jun 18, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  7d9d43aa
- Alignment - tests: renamed test_cor.py to test_alignment.py, since we test the whole module · 518dc8d6
  Nicola Vigano authored Jun 18, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  518dc8d6
- Alignment: added test for peak fitting function · 0434e92b
  Nicola Vigano authored Jun 18, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  0434e92b
- Alignment: refactored tests into two distinct classes for two distinct functionalities · f83f7735
  Nicola Vigano authored Jun 18, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  f83f7735
- added legacy test for detector translation using data from Christian · 4c89c345
  myron authored Jun 18, 2020
  
  4c89c345
17 Jun, 2020 8 commits
- Alignment: added equispaced translation images self detection · 3dc3d20c
  Nicola Vigano authored Jun 17, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  3dc3d20c
- Alignment: fixed typo · 8f6ed14a
  Nicola Vigano authored Jun 17, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  8f6ed14a
- Alignment: fixed logic error · c44913f2
  Nicola Vigano authored Jun 17, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  c44913f2
- CoR: added test for linear convolution · e96b2709
  Nicola Vigano authored Jun 17, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  e96b2709
- Alignment: fixed docstring typos · 7dc012bf
  Nicola Vigano authored Jun 17, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  7dc012bf
- Moved band-pass filters to dedicated module in misc · 4faa337b
  Nicola Vigano authored Jun 17, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  4faa337b
- Alignment: fixed typo · 15b3804e
  Nicola Vigano authored Jun 17, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  15b3804e
- Alignment: move peak extraction to dedicated function · 1b664797
  Nicola Vigano authored Jun 17, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  1b664797
16 Jun, 2020 3 commits
- Restructured filtering chain and adopted more understandable parameters. Documentation. · cc030af1
  myron authored Jun 16, 2020
  
  cc030af1
- Alignment: fixed minor changes · 0a254fb7
  Nicola Vigano authored Jun 16, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  0a254fb7
- Alignment: fixed linear correlation bug · 8db1e720
  Nicola Vigano authored Jun 16, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  8db1e720
15 Jun, 2020 15 commits
- Alignment: using logging for warnings · 51dae7c2
  Nicola Vigano authored Jun 15, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  51dae7c2
- Alignment: small variable name refactoring · fa77e048
  Nicola Vigano authored Jun 15, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  fa77e048
- Alignment: finished implementation of DetectorTranslationAlongBeam.find_shift · f8e57892
  Nicola Vigano authored Jun 15, 2020
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This is also based on some code prepared by Christian Nemoz

Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  f8e57892
- Alignment: adapted 1d max fitting to the same style as the 2d version · a99e3a84
  Nicola Vigano authored Jun 15, 2020
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Only difference: here we can use Polynomial.fit from numpy.

Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  a99e3a84
- Alignment: perform correlation between neighboring images · e9022e41
  Nicola Vigano authored Jun 14, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  e9022e41
- Alignment: adapted stub of DetectorTranslationAlongBeam to the bi-quadratic fitting. · d4a8ea03
  Nicola Vigano authored Jun 14, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  d4a8ea03
- Refactored biquadratic fitting, plus minor restyling. · c15fb522
  Nicola Vigano authored Jun 14, 2020
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- Using value coordines for peak sub-pixel position fitting.
- Passed `black` with line width = 127.

Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  c15fb522
- 1) biquadratic_refinemnt accepts NxM matrices. 2) Corrected the wrapping... · 99d8dfc1
  myron authored Jun 12, 2020 and Nicola Vigano committed Jun 15, 2020
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1) biquadratic_refinemnt accepts NxM matrices. 2) Corrected the wrapping around periodi boundaries in correlation image
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  99d8dfc1
- atomised biquadradit refinement · 671f7b85
  myron authored Jun 10, 2020 and Nicola Vigano committed Jun 15, 2020
  
  671f7b85
- passed black over last test_cor.py and alignemenet.py · 43433a75
  myron authored Jun 10, 2020 and Nicola Vigano committed Jun 15, 2020
  
  43433a75
- biquadratic refinement of correlation maximum · 7f845d70
  myron authored Jun 10, 2020 and Nicola Vigano committed Jun 15, 2020
  
  7f845d70
- add lowpass filter and unit test · 23e85822
  myron authored Jun 10, 2020 and Nicola Vigano committed Jun 15, 2020
  
  23e85822
- Alignment: added stub for the replacement of alignxc · c2c06e3e
  Nicola Vigano authored May 29, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  c2c06e3e
- Alignment: refactored CenterOfRotation into parent and derived class · dde9606b
  Nicola Vigano authored May 29, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  dde9606b
- Alignment: allow filtering on image stacks · cdf36b64
  Nicola Vigano authored May 29, 2020
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Signed-off-by: Nicola VIGANÒ <nicola.vigano@esrf.fr>
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  cdf36b64
12 Jun, 2020 5 commits
- Update processconfig.py: marge -> margin · dde98266
  Pierre Paleo authored Jun 12, 2020
  
  dde98266
- Fixed typo in nabu_config.py · a58d505d
  Nicola Vigano authored Jun 12, 2020
  
  a58d505d
- Merge branch 'master' of gitlab_tet:tomotools/nabu · b024c319
  Pierre Paleo authored Jun 12, 2020
  
  b024c319
- Fix #121 · c97a2893
  Pierre Paleo authored Jun 12, 2020
  
  c97a2893
- CI file: try to deploy artifacts with shell env · 0f53e652
  Pierre Paleo authored Jun 12, 2020
  
  0f53e652
11 Jun, 2020 3 commits
- Remove pages_docker. Pages will now be generated on another machine. · a757ed20
  Pierre Paleo authored Jun 11, 2020
  
  a757ed20
- Merge branch 'dff_limited_mem' into 'master' · 82c09a6f
  Pierre Paleo authored Jun 11, 2020
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Double Flat-field for limited-memory case

Closes #119

See merge request !43
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  82c09a6f
- Bugfix · a6439337
  Pierre Paleo authored Jun 11, 2020
  
  a6439337