Incompatibility of the hdf5 package from defaults and conda-forge channels
The following issue
from limacore import * ImportError: /.../liblimacore.so.1.9: undefined symbol: _ZNK2H510H5Location4linkE10H5L_type_tRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES9_
happens if the hdf5 package is installed from conda-forge -while lima-core is built with hdf5 from the default channel. This can be checked with:
conda list hdf5 1.10.2 hc401514_3 conda-forge ^^^^^^^^^^^
The fix is to force the installation from defaults:
conda install hdf5 -c defaults
While in theory this kind of issue should not happen, we need a way to force the installation from the proper channels...
Thanks @beteva for reporting this (on ID30).