DCT merge requestshttps://gitlab.esrf.fr/graintracking/dct/-/merge_requests2024-02-16T15:44:40+01:00https://gitlab.esrf.fr/graintracking/dct/-/merge_requests/15Add L2 cost function weights to 6D reconstruction2024-02-16T15:44:40+01:00Zheheng LiuAdd L2 cost function weights to 6D reconstruction## About
This merge request aims at adding L2 cost function weights to 6D reconstruction.
## Todo
- [x] Generate noise variances
- [x] Do the same padding and interpolation as blob intensities to noise variances
- [x] Convert noise varia...## About
This merge request aims at adding L2 cost function weights to 6D reconstruction.
## Todo
- [x] Generate noise variances
- [x] Do the same padding and interpolation as blob intensities to noise variances
- [x] Convert noise variances into weights
- [x] Generate binned blobs
Signed-off-by: Zheheng Liu <zheheng.liu@esrf.fr>
Closes #10Zheheng LiuZheheng Liuhttps://gitlab.esrf.fr/graintracking/dct/-/merge_requests/1Draft: Add generic data loading layer2023-03-01T17:43:23+01:00Nicola ViganoDraft: Add generic data loading layerTo address #1, we want to develop a generic data loading/saving layer, that allows to do IO from:
- [ ] EDF
- [ ] HDF5
This will likely be with a set of functions for each operation.
Closes #1To address #1, we want to develop a generic data loading/saving layer, that allows to do IO from:
- [ ] EDF
- [ ] HDF5
This will likely be with a set of functions for each operation.
Closes #1Wolfgang LudwigWolfgang Ludwighttps://gitlab.esrf.fr/graintracking/dct/-/merge_requests/8Draft: Resolve "pytest"2021-10-07T15:58:18+02:00Joao P C BertoldoDraft: Resolve "pytest"Closes #7Closes #7https://gitlab.esrf.fr/graintracking/dct/-/merge_requests/6Draft: Resolve "py-bkg-rm"2021-07-19T14:52:12+02:00Joao P C BertoldoDraft: Resolve "py-bkg-rm"Closes #6
# todos
- () remove zinger
- add distortion correction with nicola
- dark removal (sum all darks and subtract it from the data)
- [[absolute images computation] normalisation methods](https://gitlab.esrf.fr/graintracking...Closes #6
# todos
- () remove zinger
- add distortion correction with nicola
- dark removal (sum all darks and subtract it from the data)
- [[absolute images computation] normalisation methods](https://gitlab.esrf.fr/graintracking/dct/-/merge_requests/6#note_127088) ==> keep the 'margin' option
- get cli command from file (config parser?)
- create a cli command to encapsulate file location assumptions and generate the complete cli command
lower priority
- launch profile on the full script
- test nprocs and chunksize !!if relevant!!
# to be defined
- [moving window rules](https://gitlab.esrf.fr/graintracking/dct/-/merge_requests/6#note_127079)
- manual correlation to find rotation axis interface