From 01439f65fa04f64caae9e568d2c75b56fe74e47f Mon Sep 17 00:00:00 2001
From: Peter Reischig <peter.reischig@esrf.fr>
Date: Tue, 18 Sep 2012 14:33:31 +0000
Subject: [PATCH] Bug fix to bounding box problem to avoid grains shift in the
grain map. By Nicola.
git-svn-id: https://svn.code.sf.net/p/dct/code/trunk@772 4c865b51-4357-4376-afb4-474e03ccb993
---
4_grains/GtThreshold.m | 2 +-
zUtil_TomoUtils/GtGrainsManager.m | 5 +++--
2 files changed, 4 insertions(+), 3 deletions(-)
diff --git a/4_grains/GtThreshold.m b/4_grains/GtThreshold.m
index 6049719f..65517f76 100644
--- a/4_grains/GtThreshold.m
+++ b/4_grains/GtThreshold.m
@@ -162,7 +162,7 @@ classdef GtThreshold < handle
segvol = obj.segmentVol(volume, threshold, do_morpho, mess, center);
end
- function thresholdSingleGrainInFile(obj, phaseID, grainID, threshold, center)
+ function grain = thresholdSingleGrainInFile(obj, phaseID, grainID, threshold, center)
% GTTHRESHOLD/THRESHOLDSINGLEGRAININFILE
fprintf('Segmenting Grain %d, from phase %d.. ', grainID, phaseID);
diff --git a/zUtil_TomoUtils/GtGrainsManager.m b/zUtil_TomoUtils/GtGrainsManager.m
index 12b9aaf5..34e8c867 100644
--- a/zUtil_TomoUtils/GtGrainsManager.m
+++ b/zUtil_TomoUtils/GtGrainsManager.m
@@ -229,10 +229,11 @@ classdef GtGrainsManager < GtVolView
obj.sample.phases{phaseID}.setThreshold(grainID, threshold);
segmenter = GtThreshold();
if (exist('center', 'var'))
- segmenter.thresholdSingleGrainInFile(phaseID, grainID, threshold, center);
+ grain = segmenter.thresholdSingleGrainInFile(phaseID, grainID, threshold, center);
else
- segmenter.thresholdSingleGrainInFile(phaseID, grainID, threshold);
+ grain = segmenter.thresholdSingleGrainInFile(phaseID, grainID, threshold);
end
+ obj.sample.phases{phaseID}.setBoundingBox(grainID, grain.segbb);
end
end
--
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