[core][process] Checkout kind to choose transformation to apply

darfix/core/process.py

@@ -282,11 +282,13 @@ class _Transformation:
         dataset, indices, li_indices, bg_dataset = dataset
         magnification = self._properties['magnification'] if 'magnification' in self._properties else None
         pixelSize = self._properties['pixelSize'] if 'pixelSize' in self._properties else None
+        kind = self._properties['kind'] if 'kind' in self._properties else True
         rotate = self._properties['rotate'] if 'rotate' in self._properties else None
         if dataset and dataset.dims.ndim:
-            if dataset.dims.ndim == 1:
+            if dataset.dims.ndim == 1 and kind:
                 dataset.compute_transformation(PixelSize[pixelSize].value,
-                                               rotate)
+                                               kind="rsm",
+                                               rotate=rotate)
             else:
                 dataset.compute_transformation(magnification)
         return dataset, indices, li_indices, bg_dataset